RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 YIPF5Q969M3 257 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 FGGYQ96C11 551 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 USB1Q9BQ65 265 aaKnown RBP13.53□□□□□ -0.24
SHOX2-202ENST00000425436 CACNG2Q9Y698 323 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 A0A1B0GTI1 187 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 A6NIN4 97 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 ORC5O43913 435 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 ARSBP15848 533 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 OTX1P32242 354 aaPredicted RBP13.52□□□□□ -0.25
SHOX2-202ENST00000425436 GNALP38405 381 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 POU3F4P49335 361 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF83P51522 516 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF627Q7L945 461 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 AKAP14Q86UN6 197 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 C17orf78Q8N4C9 275 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 OR8B12Q8NGG6 310 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 OR51E1Q8TCB6 317 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 CREB3L1Q96BA8 519 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 PGAM5Q96HS1 289 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 BOD1Q96IK1 185 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 KCNN3Q9UGI6 736 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 TIMM10BQ9Y5J6 103 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 LRBAP50851 2863 aa13.52□□□□□ -0.25
SHOX2-202ENST00000425436 NAP1L6A6NFF2 107 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 H3BSH0 61 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 SIAH2O43255 324 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 MTRF1O75570 445 aaKnown RBP13.51□□□□□ -0.25
SHOX2-202ENST00000425436 CD79AP11912 226 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 SLC6A1P30531 599 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 TPTEP56180 551 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 GPR176Q14439 515 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 FAM189A2Q15884 450 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 GLYATL3Q5SZD4 288 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 DRAM2Q6UX65 266 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 SEZ6L2Q6UXD5 910 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 KRT74Q7RTS7 529 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 CDH24Q86UP0 819 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF295-AS1Q8N0V1 137 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 OR1M1Q8NGA1 313 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 OR51D1Q8NGF3 324 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 MARVELD1Q9BSK0 173 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 PLEK2Q9NYT0 353 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF224Q9NZL3 707 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF391Q9UJN7 358 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
SHOX2-202ENST00000425436 HEATR1Q9H583 2144 aaKnown RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 MEIOCA2RUB1 952 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SGCEO43556 437 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SSX4O60224 188 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SCGNO76038 276 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 ALX3O95076 343 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 ALDOBP05062 364 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 FAM157BP0CG42 384 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 RAB6AP20340 208 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 CRYGSP22914 178 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 CDK2P24941 298 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 PTH2RP49190 550 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 BTG1P62324 171 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 GALK2Q01415 458 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SSBP1Q04837 148 aaKnown RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 RSBN1Q5VWQ0 802 aaPredicted RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 Q6ZSR3 168 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 FAM57BQ71RH2 274 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 PRSS45Q7RTY3 260 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 COMMD2Q86X83 199 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 JAGN1Q8N5M9 183 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 PLPP7Q8NBV4 271 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 OR1J2Q8NGS2 313 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 SLC25A28Q96A46 364 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 DPAGT1Q9H3H5 408 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 METTL17Q9H7H0 456 aaPredicted RBP13.5□□□□□ -0.25
SHOX2-202ENST00000425436 NOX3Q9HBY0 568 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 TAS2R8Q9NYW2 309 aa13.5□□□□□ -0.25
SHOX2-202ENST00000425436 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 M0R135 149 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 M0R1B8 84 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 LANCL1O43813 399 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 CTAG2O75638 210 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 IGLV3-1P01715 115 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-202ENST00000425436 HLA-DMAP28067 261 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 TAS2R20P59543 309 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 DGCR2P98153 550 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 SPOCK1Q08629 439 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 DAZAP2Q15038 168 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RAB12Q6IQ22 244 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 DNM1P46Q6ZS02 220 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 SLC16A14Q7RTX9 510 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 MDP1Q86V88 176 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms