RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 XKRY2A2RUG3 117 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 FAM159BA6NKW6 160 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 A8MWP6 167 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 C1orf196B1AJZ1 125 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 INMT-MINDY4F8WBC2 141 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TEX46H3BTG2 121 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 RPL36A-HNRNPH2H7BZ11 118 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 K7EP13 123 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 FXYD1O00168 92 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SDHDO14521 159 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TP53I11O14683 189 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MBTPS2O43462 519 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ORC5O43913 435 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SOX15O60248 233 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TPST1O60507 370 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 RPP14O95059 124 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CSTAP01040 98 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 IGF2P01344 180 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PPBPP02775 128 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 IFNA6P05013 189 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SFTPBP07988 381 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 HOXB7P09629 217 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ANXA3P12429 323 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GABRA1P14867 456 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CXCL2P19875 107 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CXCL3P19876 107 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TBXA2RP21731 343 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MAPK3P27361 379 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PSMB6P28072 239 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CD200P41217 278 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MAGEA12P43365 314 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CAPZBP47756 277 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GCLMP48507 274 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 EVX1P49640 407 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CCR6P51684 374 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TDGF1P3P51864 188 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 VSX2P58304 361 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 IL5RAQ01344 420 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ARHGAP1Q07960 439 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TSPAN31Q12999 210 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 DGCR6Q14129 220 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GAMTQ14353 236 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PIGHQ14442 188 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF630Q2M218 657 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 NDUFAF6Q330K2 333 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 VPS26BQ4G0F5 336 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM255AQ5JRV8 349 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GLRA4Q5JXX5 417 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 DCST2Q5T1A1 773 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GPRC6AQ5T6X5 926 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 N4BP2L1Q5TBK1 243 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 HACD4Q5VWC8 232 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MED27Q6P2C8 311 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PLET1Q6UQ28 207 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SPESP1Q6UW49 350 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 WASH2PQ6VEQ5 465 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CERS6Q6ZMG9 384 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TMPRSS11AQ6ZMR5 421 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 EIF3MQ7L2H7 374 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SLC16A14Q7RTX9 510 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF720Q7Z2F6 126 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 P4HA3Q7Z4N8 544 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 RANBP3LQ86VV4 465 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 C10orf107Q8IVU9 208 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SERPINA12Q8IW75 414 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 KATNAL2Q8IYT4 538 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SAXO1Q8IYX7 474 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GCNT2Q8N0V5 402 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF555Q8NEP9 628 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 OR5T3Q8NGG3 340 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 OR5J2Q8NH18 312 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 OR4K15Q8NH41 348 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 COQ8AQ8NI60 647 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CNIH3Q8TBE1 160 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SPPL2BQ8TCT7 592 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ING5Q8WYH8 240 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 FCGR1BQ92637 280 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 OSTF1Q92882 214 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 HIST1H2BAQ96A08 127 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CREB3L1Q96BA8 519 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MALSU1Q96EH3 234 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TPD52L3Q96J77 140 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 FCRL1Q96LA6 429 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TEX37Q96LM6 180 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 GUCD1Q96NT3 240 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TGM7Q96PF1 710 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 INTS14Q96SY0 518 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PARK7Q99497 189 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TEAD3Q99594 435 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PKMYT1Q99640 499 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TXN2Q99757 166 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 C7orf50Q9BRJ6 194 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM43Q9BTV4 400 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ADAT1Q9BUB4 502 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TMED9Q9BVK6 235 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 SNHG12Q9BXW3 62 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CCDC90BQ9GZT6 254 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 MED28Q9H204 178 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PRO1933Q9H354 126 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 RIBC2Q9H4K1 309 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms