RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZBTB8AQ96BR9 441 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 PRRG4Q9BZD6 226 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 NELFAQ9H3P2 528 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 RAB22AQ9UL26 194 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 LOC102723996A0A087X1L8 192 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 MCRIP1C9JLW8 97 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 SELEP16581 610 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 CSNK2A1P68400 391 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-204ENST00000423636 PLGLB1Q02325 96 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 SP6Q3SY56 376 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 HACD4Q5VWC8 232 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 SKA3Q8IX90 412 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 GPR137CQ8N3F9 429 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 CSNK2A3Q8NEV1 391 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 WNT2BQ93097 391 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 PAPOLGQ9BWT3 736 aaKnown RBP10.43□□□□□ -0.74
PTPRN-204ENST00000423636 WDR54Q9H977 334 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 FLVCR1Q9Y5Y0 555 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 TMEM265A0A087WTH1 108 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 LDLRAD4O15165 306 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 RLN2P04090 185 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 ISG15P05161 165 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 SP9P0CG40 484 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 CD79AP11912 226 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 ELFN2Q5R3F8 820 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 LY6G6FQ5SQ64 297 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 SLC16A14Q7RTX9 510 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 GGNQ86UU5 652 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 GALNT11Q8NCW6 608 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 OR14K1Q8NGZ2 314 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 ANGPTL6Q8NI99 470 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 LRBAP50851 2863 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 COL5A1P20908 1838 aaPredicted RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 CCDC163A0A0D9SF12 145 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF503-AS2A6NEH8 195 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ZSCAN5BA6NJL1 495 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 M0R296 226 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 AMY2BP19961 511 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 DLX5P56178 289 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 SEC61A1P61619 476 aaKnown RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF546Q86UE3 836 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 MED12LQ86YW9 2145 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 GCNT2Q8N0V5 402 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 GJC3Q8NFK1 279 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 LUZP4Q9P127 313 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 IL36RNQ9UBH0 155 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 SPAARA0A1B0GVQ0 90 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 PLSCR5A0PG75 271 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 MEGF11A6BM72 1044 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 CDX4O14627 284 aaPredicted RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 GABRA1P14867 456 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF24P17028 368 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 PTGFRP43088 359 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 B3GALT5-AS1P59052 145 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 RAC1P63000 192 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 PSG4Q00888 419 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 ELP2Q6IA86 826 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 C3P1Q6ZMU1 363 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 RFPL4BQ6ZWI9 263 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 TMEM123Q8N131 208 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 PPP1R1CQ8WVI7 109 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 PARP12Q9H0J9 701 aaKnown RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 EHFQ9NZC4 300 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 NXT1Q9UKK6 140 aaKnown RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 MCTS1Q9ULC4 181 aaKnown RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 LIPGQ9Y5X9 500 aa10.42□□□□□ -0.74
PTPRN-204ENST00000423636 MAP1AP78559 2803 aaPredicted RBP10.42□□□□□ -0.74
PTPRN-204ENST00000423636 IL32P24001 234 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 OR3A2P47893 321 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 QRFPP83859 136 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF92Q03936 586 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 SULF2Q8IWU5 870 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 AQP3Q92482 292 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 C1orf147Q96MC9 270 aaPredicted RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 NARFLQ9H6Q4 476 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 KCNN3Q9UGI6 736 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 ATRXP46100 2492 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 TRAV39A0A0B4J263 110 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 NXPH3O95157 252 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 MRPS10P82664 201 aaKnown RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 SLC25A53Q5H9E4 307 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 HES3Q5TGS1 186 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 ABHD17BQ5VST6 288 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF488Q96MN9 340 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 HEATR1Q9H583 2144 aaKnown RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 OR2S2Q9NQN1 319 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms