RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CRYBB2P43320 205 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MAP2K4P45985 399 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 SRP9P49458 86 aaKnown RBP7.85□□□□□ -1.15
PDGFC-202ENST00000422544 PDLIM4P50479 330 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 WNT4P56705 351 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 SLC3A1Q07837 685 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 PRDX4Q13162 271 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MAB21L1Q13394 359 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 CDK5R1Q15078 307 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 CCDC58Q4VC31 144 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 DMRTC1Q5HYR2 192 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 CLEC2AQ6UVW9 174 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 DNM1P46Q6ZS02 220 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 Q6ZSR3 168 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MOB3CQ70IA8 216 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 PRSS48Q7RTY5 328 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 TGIF2LYQ8IUE0 185 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 FTMTQ8N4E7 242 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 OR51A4Q8NGJ6 313 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 OR8S1Q8NH09 359 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 OR5AK2Q8NH90 309 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 HAVCR2Q8TDQ0 301 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 FAM168AQ92567 244 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 CCL17Q92583 94 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MEGF10Q96KG7 1140 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 Q96MF0 132 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 OR5M11Q96RB7 305 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MND1Q9BWT6 205 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 YTHDF1Q9BYJ9 559 aaKnown RBP7.85□□□□□ -1.15
PDGFC-202ENST00000422544 TRIM36Q9NQ86 728 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 ENPP5Q9UJA9 477 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 NOP16Q9Y3C1 178 aaKnown RBP7.85□□□□□ -1.15
PDGFC-202ENST00000422544 MPC1Q9Y5U8 109 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 LOC100289279A0A1B0GTE1 492 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 PNMA8CA0A1B0GUJ8 204 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 TMEM212A6NML5 194 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ANXA2P2A6NMY6 339 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 RP2O75695 350 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 NRASP01111 189 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 GRPP07492 148 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 TNFRSF1AP19438 455 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ACHEP22303 614 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 PMELP40967 661 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 CD200P41217 278 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 CDH15P55291 814 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 DSCR9P59020 149 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MRPS11P82912 194 aaKnown RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 SPHARQ15513 63 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MED22Q15528 200 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MPPED2Q15777 294 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 CEP78Q5JTW2 689 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 CLVS2Q5SYC1 327 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ZBTB37Q5TC79 503 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 PRAMEF6Q5VXH4 476 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 DMKNQ6E0U4 476 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 KRT74Q7RTS7 529 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MOGAT3Q86VF5 341 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ZDHHC23Q8IYP9 409 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 SPERTQ8NA61 448 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 CCDC54Q8NEL0 328 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF420Q8TAQ5 688 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 RPS4Y2Q8TD47 263 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 C10orf105Q8TEF2 133 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 OR5P3Q8WZ94 311 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 GHSRQ92847 366 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ITFG2Q969R8 447 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 FGGYQ96C11 551 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ITPKCQ96DU7 683 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 HIST1H2AAQ96QV6 131 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MICU1Q9BPX6 476 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 FGF23Q9GZV9 251 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 COMMD4Q9H0A8 199 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 PLEKHA1Q9HB21 404 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 GCM1Q9NP62 436 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 MYOZ1Q9NP98 299 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 GPR173Q9NS66 373 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF275Q9NSD4 429 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 UFSP2Q9NUQ7 469 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 DCAF16Q9NXF7 216 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 HHLA2Q9UM44 414 aa7.84□□□□□ -1.15
PDGFC-202ENST00000422544 LSM2Q9Y333 95 aaKnown RBP7.84□□□□□ -1.15
PDGFC-202ENST00000422544 DHRS7CA6NNS2 312 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 PPIHO43447 177 aaKnown RBP7.83□□□□□ -1.16
PDGFC-202ENST00000422544 CSF3P09919 207 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 HSMCR30P0CW71 290 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF12P17014 697 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 CELP19835 753 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 THBS2P35442 1172 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 TMEM33P57088 247 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 TAS2R43P59537 309 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 GABARAPL2P60520 117 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 MZT1Q08AG7 82 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 RIN1Q13671 783 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 HFEQ30201 348 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 CEACAM21Q3KPI0 293 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 PLCXD3Q63HM9 321 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 TMEM42Q69YG0 159 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 KCTD8Q6ZWB6 473 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms