RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 PLA2G7Q13093 441 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 GPR176Q14439 515 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 DMRTC1Q5HYR2 192 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 PLET1Q6UQ28 207 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 ZNF704Q6ZNC4 412 aaPredicted RBP7.73□□□□□ -1.17
HPS4-204ENST00000422379 SERPINA12Q8IW75 414 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 DUSP18Q8NEJ0 188 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 OR13C3Q8NGS6 347 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 SYNPRQ8TBG9 265 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 ITLN2Q8WWU7 325 aaPredicted RBP7.73□□□□□ -1.17
HPS4-204ENST00000422379 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 NKX3-1Q99801 234 aaPredicted RBP7.73□□□□□ -1.17
HPS4-204ENST00000422379 AUNIPQ9H7T9 357 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 ELOVL5Q9NYP7 299 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 TAS2R4Q9NYW5 299 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 NLKQ9UBE8 527 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 STEAP1Q9UHE8 339 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 ATPIF1Q9UII2 106 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 STARD10Q9Y365 291 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 ETV7Q9Y603 341 aa7.73□□□□□ -1.17
HPS4-204ENST00000422379 FAM240BA0A1B0GVZ2 78 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 CTDSPLO15194 276 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 LCATP04180 440 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 ZNF35P13682 527 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 HOXB1P14653 301 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 CCL1P22362 96 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 DDOSTP39656 456 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 EIF2B2P49770 351 aaKnown RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 CBX3Q13185 183 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 HLXQ14774 488 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 MSMPQ1L6U9 139 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 FBXL19-AS1Q494R0 122 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 TMEM244Q5VVB8 128 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 KRT74Q7RTS7 529 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 RNF144BQ7Z419 303 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 DPPA2Q7Z7J5 298 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 OR1J2Q8NGS2 313 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 SMIM4Q8WVI0 70 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 NANOS1Q8WY41 292 aaKnown RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 GCDHQ92947 438 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 UPRTQ96BW1 309 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 HAVCR1Q96D42 359 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 ADAT3Q96EY9 351 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 PGAM5Q96HS1 289 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 FAM71F1Q96KD3 344 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 WFIKKN1Q96NZ8 548 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 FOXJ3Q9UPW0 622 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 CELSR2Q9HCU4 2923 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 IGHV2OR16-5A0A0B4J2B6 119 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 A0A1B0GUH1 482 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 GSTZ1O43708 216 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 SMPD2O60906 423 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 LILRA1O75019 489 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 SLC6A1P30531 599 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 BTCP35070 178 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 ASCL1P50553 236 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 ART1P52961 327 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 SRSF1Q07955 248 aaKnown RBP eCLIP7.72□□□□□ -1.17
HPS4-204ENST00000422379 PPA1Q15181 289 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 SPATA46Q5T0L3 261 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 HACD4Q5VWC8 232 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 RSBN1Q5VWQ0 802 aaPredicted RBP7.72□□□□□ -1.17
HPS4-204ENST00000422379 FAM166AQ6J272 317 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 Q6ZSR3 168 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 CCDC36Q8IYA8 594 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 STEAP2Q8NFT2 490 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 OR51D1Q8NGF3 324 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 OR51A2Q8NGJ7 313 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 OR14K1Q8NGZ2 314 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 RAB40AQ8WXH6 277 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 KCNK15Q9H427 330 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 MOB1AQ9H8S9 216 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 CKLFQ9UBR5 152 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 AMDHD2Q9Y303 409 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 CACNG2Q9Y698 323 aa7.72□□□□□ -1.17
HPS4-204ENST00000422379 USP9YO00507 2555 aaPredicted RBP7.71□□□□□ -1.17
HPS4-204ENST00000422379 FBN2P35556 2912 aa7.71□□□□□ -1.17
HPS4-204ENST00000422379 A0A0U1RQV5 110 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 hCG_38984A0A1B0GV85 526 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 SLC17A2O00624 439 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 SIAH2O43255 324 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 CDK2P24941 298 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 APLNRP35414 380 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 PTH2RP49190 550 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 SCAND1P57086 179 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 FAM3AP98173 230 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 PLP2Q04941 152 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 RAB11BQ15907 218 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 TMEM69Q5SWH9 247 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 TOMM5Q8N4H5 51 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 SPSB4Q96A44 273 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 FGGYQ96C11 551 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 S100A16Q96FQ6 103 aaKnown RBP7.71□□□□□ -1.18
HPS4-204ENST00000422379 REEP6Q96HR9 211 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 OBP2BQ9NPH6 170 aa7.71□□□□□ -1.18
HPS4-204ENST00000422379 ASH1LQ9NR48 2969 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms