RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ELOVL3Q9HB03 270 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CACYBPQ9HB71 228 aaKnown RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 NANSQ9NR45 359 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 B3GAT1Q9P2W7 334 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SNX24Q9Y343 169 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 TMED5Q9Y3A6 229 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 RNF103-CHMP3A0A140T963 221 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 LOC102725191A0A1B0GVB3 256 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 FTCDNL1E5RQL4 147 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 NPFFO15130 113 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 NDUFB4O95168 129 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR6A2O95222 327 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 ECDO95905 644 aaPredicted RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 ALDOBP05062 364 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 DBIP07108 87 aaKnown RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 GUSBP08236 651 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 INHBAP08476 426 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 GKN3PP0CG01 181 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 LAMP1P11279 417 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 NEFHP12036 1026 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 CBLP22681 906 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 GRPRP30550 384 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 TNFSF8P32971 234 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 PHBP35232 272 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 FOXA1P55317 472 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 NAA20P61599 178 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 HBA1P69905 142 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 KIAA0040Q15053 153 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 FAM98BQ52LJ0 330 aaKnown RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 PABPC1L2AQ5JQF8 200 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 MRPL2Q5T653 305 aaKnown RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 IL23RQ5VWK5 629 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 AP1ARQ63HQ0 302 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 TNFAIP8L2Q6P589 184 aaPredicted RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 C5orf46Q6UWT4 87 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 CCDC190Q86UF4 302 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 PEX5LQ8IYB4 626 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR4K5Q8NGD3 323 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR51D1Q8NGF3 324 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR11L1Q8NGX0 322 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 CORO2AQ92828 525 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 SLC38A4Q969I6 547 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR5M11Q96RB7 305 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 DDOQ99489 341 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 SIRPDQ9H106 197 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 MTHFD2LQ9H903 347 aaPredicted RBP3.9□□□□□ -1.79
SFXN1-202ENST00000421887 TMEM38BQ9NVV0 291 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 GLTPQ9NZD2 209 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 ONECUT1Q9UBC0 465 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 RPS6KB2Q9UBS0 482 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 OR14J1Q9UGF5 321 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 KCNK7Q9Y2U2 307 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 FIS1Q9Y3D6 152 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 KPTNQ9Y664 436 aa3.9□□□□□ -1.79
SFXN1-202ENST00000421887 STAB2Q8WWQ8 2551 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 EXOC1LA0A1B0GW35 172 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 A0A1W2PRD5 423 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 A0A1W2PRF3 423 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 A0A1W2PRM7 423 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 TCRBV4S1A1TA0A5B7 111 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 MS4A18H0YCH9 400 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 NPIPB7O75200 414 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 LYPLA1O75608 230 aaPredicted RBP3.89□□□□□ -1.79
SFXN1-202ENST00000421887 SLC22A3O75751 556 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 FSTL3O95633 263 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 HLA-DOBP13765 273 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 TUBG1P23258 451 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 SAA4P35542 130 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 CHI3L1P36222 383 aaPredicted RBP3.89□□□□□ -1.79
SFXN1-202ENST00000421887 ACAA2P42765 397 aaKnown RBP3.89□□□□□ -1.79
SFXN1-202ENST00000421887 MAGEA4P43358 317 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 GLIPR1P48060 266 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 RGS6P49758 472 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF75DP51815 510 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 BIDP55957 195 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 PUDPQ08623 228 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 MZT1Q08AG7 82 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 PSG7Q13046 419 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 OR8B8Q15620 311 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 MEP1BQ16820 701 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF181Q2M3W8 571 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 MS4A18Q3C1V0 323 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 RFTN2Q52LD8 501 aaPredicted RBP3.89□□□□□ -1.79
SFXN1-202ENST00000421887 CFAP157Q5JU67 520 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 GGNBP1Q5YKI7 109 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 RAB12Q6IQ22 244 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 METAP1DQ6UB28 335 aaPredicted RBP3.89□□□□□ -1.79
SFXN1-202ENST00000421887 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 NHLRC1Q6VVB1 395 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 ZCCHC23Q6ZST2 131 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 CCDC121Q6ZUS5 278 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 BTN2A1Q7KYR7 527 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 PIGWQ7Z7B1 504 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 NUDCD3Q8IVD9 361 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 CLEC4FQ8N1N0 589 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 NPEPL1Q8NDH3 523 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 OR5AU1Q8NGC0 362 aa3.89□□□□□ -1.79
SFXN1-202ENST00000421887 OR4A15Q8NGL6 344 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms