RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TEAD3Q99594 435 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 CCL13Q99616 98 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 PCGF1Q9BSM1 259 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF747Q9BV97 191 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 PAPOLGQ9BWT3 736 aaKnown RBP9.12□□□□□ -0.95
SSBP3-206ENST00000420121 WDR13Q9H1Z4 485 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF556Q9HAH1 456 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 FAM206AQ9NX38 181 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 PCDHGB1Q9Y5G3 927 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 MPC1Q9Y5U8 109 aa9.12□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF850A8MQ14 1090 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 M0R129 80 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PSMD9O00233 223 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 P2RY10O00398 339 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 TMPRSS2O15393 492 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 HOXA3O43365 443 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PRKYO43930 277 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 MITFO75030 526 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 SRSF10O75494 262 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 TOX4O94842 621 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 TFF1P04155 84 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 LIPFP07098 398 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 SELLP14151 372 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 MUC1P15941 1255 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 MTNR1AP48039 350 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 TGM4P49221 684 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 ROM1Q03395 351 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 FOXL1Q12952 345 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PTGES3Q15185 160 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 ATPAF1Q5TC12 328 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 STUMQ69YW2 141 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 BCDIN3DQ7Z5W3 292 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 OR10Z1Q8NGY1 313 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 DNAJC9Q8WXX5 260 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 RPL3LQ92901 407 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PPP1R14AQ96A00 147 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 SLC25A28Q96A46 364 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PKP2Q99959 881 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 YIPF3Q9GZM5 350 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 NIPAL2Q9H841 368 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 YY1AP1Q9H869 796 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 PAPOLBQ9NRJ5 636 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 TVP23BQ9NYZ1 205 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 RPUSD1Q9UJJ7 312 aaKnown RBP9.11□□□□□ -0.95
SSBP3-206ENST00000420121 LAMP5Q9UJQ1 280 aa9.11□□□□□ -0.95
SSBP3-206ENST00000420121 VWFP04275 2813 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 A0A0U1RQV5 110 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 MRPL3P09001 348 aaKnown RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 GNALP38405 381 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 BPIFB3P59826 476 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 ARF6P62330 175 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 IL5RAQ01344 420 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 MFGE8Q08431 387 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 ATP6AP1Q15904 470 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 SNAPC1Q16533 368 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 GPR157Q5UAW9 335 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 Q6YL49 198 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 KRT77Q7Z794 578 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 PNLDC1Q8NA58 520 aaKnown RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 SCCPDHQ8NBX0 429 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 OR5T2Q8NGG2 359 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 OR5K1Q8NHB7 308 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 PIGCQ92535 297 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 C12orf43Q96C57 262 aaKnown RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 RAB3IPQ96QF0 476 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-206ENST00000420121 OR8B4Q96RC9 309 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 MICU1Q9BPX6 476 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 RTL8AQ9BWD3 113 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 TTTY10Q9BZA0 68 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 HAO2Q9NYQ3 351 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF391Q9UJN7 358 aa9.1□□□□□ -0.95
SSBP3-206ENST00000420121 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ACOD1A6NK06 481 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 TMEM210A6NLX4 147 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ANXA2P2A6NMY6 339 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ZAR1LA6NP61 321 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 AKR7A2O43488 359 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 RHBDL1O75783 438 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ECDO95905 644 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-206ENST00000420121 MELTFP08582 738 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ESRRGP62508 458 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 RELBQ01201 579 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 SNCBQ16143 134 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 MICBQ29980 383 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 DMRTC1Q5HYR2 192 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 SLX4IPQ5VYV7 408 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 C12orf73Q69YU5 71 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 KDM4DQ6B0I6 523 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 C16orf87Q6PH81 154 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF788Q6ZQV5 615 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 ZNF679Q8IYX0 411 aa9.09□□□□□ -0.95
SSBP3-206ENST00000420121 FTMTQ8N4E7 242 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms