RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 SURF2Q15527 256 aaPredicted RBP12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 OR8B8Q15620 311 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CSRP2Q16527 193 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ATPAF1Q5TC12 328 aaPredicted RBP12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 IGF2-ASQ6U949 168 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PLXDC2Q6UX71 529 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PIP4P1Q86T03 277 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SPSB4Q96A44 273 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 EDARQ9UNE0 448 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 R4GN57 208 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SPEGQ15772 3267 aa12.71□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PLSCR5A0PG75 271 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FCGR2AP12318 317 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GNB3P16520 340 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAHP16930 419 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PLGLB1Q02325 96 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC7A5P1Q8MH63 180 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR13C8Q8NGS7 320 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR4K15Q8NH41 348 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DVL3Q92997 716 aaPredicted RBP12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SGK3Q96BR1 496 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC6A7Q99884 636 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HSF4Q9ULV5 492 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PRSS44E7EML9 344 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 M0QYG6 137 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MASP2O00187 686 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC22A5O76082 557 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CD8AP01732 235 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LCATP04180 440 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SERPINA5P05154 406 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MMP7P09237 267 aaPredicted RBP12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HRH1P35367 487 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HTR2BP41595 481 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RBP2P50120 134 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PSG4Q00888 419 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DHRS2Q13268 280 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 UBE2V2Q15819 145 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LGALSLQ3ZCW2 172 aaPredicted RBP12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC22A6Q4U2R8 563 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ASCL4Q6XD76 172 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LYG2Q86SG7 212 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DTX1Q86Y01 620 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM104Q8NE00 496 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF680Q8NEM1 530 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR5M8Q8NGP6 311 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ABHD3Q8WU67 409 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PHB2Q99623 299 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 C1QTNF5Q9BXJ0 243 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 METTL9Q9H1A3 318 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CA10Q9NS85 328 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC7A11Q9UPY5 501 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 KCNK7Q9Y2U2 307 aa12.7□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF816-ZNF321PA0A0X1KG74 233 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 hCG_38984A0A1B0GV85 526 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 WIPF3A6NGB9 483 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 L7N2F9 121 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ARR3P36575 388 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PMELP40967 661 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 STARP49675 285 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SNRPD2P62316 118 aaKnown RBP12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SNAI3Q3KNW1 292 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF774Q6NX45 483 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HOGA1Q86XE5 327 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM251Q8N6I4 163 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR51T1Q8NGJ9 327 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TERB2Q8NHR7 220 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ST8SIA4Q92187 359 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 BORCS8Q96FH0 119 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NICN1Q9BSH3 213 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 WNT5BQ9H1J7 359 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 UBQLN2Q9UHD9 624 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF175Q9Y473 711 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 KNTC1P50748 2209 aa12.69□□□□□ -0.38
HLA-DPA1-242ENST00000419277 A0A0B4J2A0 478 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 J3QW42 95 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GOSR2O14653 212 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SSX5O60225 188 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DUS4LO95620 317 aaKnown RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CSTBP04080 98 aaKnown RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RPA2P15927 270 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FPR2P25090 351 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CD34P28906 385 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms