RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 OR5A2Q8NGI9 324 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 CHAC2Q8WUX2 184 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 ABHD1Q96SE0 405 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 RANBP3Q9H6Z4 567 aaPredicted RBP7.32□□□□□ -1.24
USP54-203ENST00000418501 TBC1D24Q9ULP9 559 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 C14orf166Q9Y224 244 aaKnown RBP7.32□□□□□ -1.24
USP54-203ENST00000418501 AKR7A2O43488 359 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 WISP1O95388 367 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 AMY2AP04746 511 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 NAT2P11245 290 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 ANXA3P12429 323 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 SERPINA2P20848 420 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 TNFSF4P23510 183 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 GIFP27352 417 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 GNG3P63215 75 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 GABRA6Q16445 453 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 SPACA3Q8IXA5 215 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 OR5M9Q8NGP3 310 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 PPP1R35Q8TAP8 253 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 FAM57AQ8TBR7 257 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 ORAI1Q96D31 301 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 MED30Q96HR3 178 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 MARVELD1Q9BSK0 173 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 SELENOIQ9C0D9 397 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 NOX3Q9HBY0 568 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 HRASLSQ9HDD0 168 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 COMMD9Q9P000 198 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 ZNF222Q9UK12 451 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 CDC14BO60729 498 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 FCER2P06734 321 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 SLC6A1P30531 599 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 PMP22Q01453 160 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 KCNJ8Q15842 424 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 TATDN3Q17R31 274 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 CD276Q5ZPR3 534 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 NAA40Q86UY6 237 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 LSRQ86X29 649 aaPredicted RBP7.32□□□□□ -1.24
USP54-203ENST00000418501 VRK1Q99986 396 aaPredicted RBP7.32□□□□□ -1.24
USP54-203ENST00000418501 NUDT15Q9NV35 164 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 KLK13Q9UKR3 277 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 LIPGQ9Y5X9 500 aa7.32□□□□□ -1.24
USP54-203ENST00000418501 A0A0B4J203 849 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 CST4P01036 141 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 IL5P05113 134 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MGMTP16455 207 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 BLVRBP30043 206 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 TIMP3P35625 211 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 NUP62P37198 522 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 ALDH3B1P43353 468 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 C3AR1Q16581 482 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 C6orf183Q5T699 404 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 GAL3ST1Q99999 423 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 CLEC4MQ9H2X3 399 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 SDK2Q58EX2 2172 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 PCNX2A6NKB5 2137 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 A0A1B0GW55 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 SNRPGP15A8MWD9 76 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 IL18BPO95998 194 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 CRYAAP02489 173 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L2P0CJ85 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L3P0CJ86 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L4P0CJ87 422 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L5P0CJ88 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L6P0CJ89 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4L7P0CJ90 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 IFITM2Q01629 132 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 GK2Q14410 553 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 NPRL2Q8WTW4 380 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 SLC25A38Q96DW6 304 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MMP28Q9H239 520 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 OR51J1Q9H342 316 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 ZNF286AQ9HBT8 521 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 ELOVL5Q9NYP7 299 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DUX4Q9UBX2 424 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 CACNA1HO95180 2353 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 TMEM210A6NLX4 147 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 GMDSO60547 372 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 CTXN2P0C2S0 81 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 RAC2P15153 192 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 PPP3CBP16298 524 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 HIST1H1DP16402 221 aaKnown RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 MAGEB1P43366 347 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 IDH3GP51553 393 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 IFITM3Q01628 133 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 C4orf46Q504U0 113 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 NKAPLQ5M9Q1 402 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 TFAP2EQ6VUC0 442 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 OSR2Q8N2R0 312 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 ARRDC1Q8N5I2 433 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 RNF170Q96K19 258 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 ZNF442Q9H7R0 627 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 AHCTF1Q8WYP5 2266 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MBD3L4A6NDZ8 208 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 MBD3L3A6NE82 208 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 A6NIN4 97 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MBD3L5A6NJ08 208 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms