RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PCK2Q16822 640 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 HAGHLQ6PII5 290 aaPredicted RBP10.47□□□□□ -0.73
LIMK1-202ENST00000418310 C5orf46Q6UWT4 87 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 PCDHB16Q9NRJ7 776 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 LSM5Q9Y4Y9 91 aaKnown RBP10.47□□□□□ -0.73
LIMK1-202ENST00000418310 FLVCR1Q9Y5Y0 555 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 MBTPS2O43462 519 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 IL2RAP01589 272 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 TPT1P13693 172 aaKnown RBP10.47□□□□□ -0.73
LIMK1-202ENST00000418310 CHRFAM7AQ494W8 412 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 TMEM128Q5BJH2 165 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 BAP18Q8IXM2 172 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 OIT3Q8WWZ8 545 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 C1orf147Q96MC9 270 aaPredicted RBP10.47□□□□□ -0.73
LIMK1-202ENST00000418310 UQCC2Q9BRT2 126 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 RAB33BQ9H082 229 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 SRPK3Q9UPE1 567 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 DOCK7Q96N67 2140 aa10.47□□□□□ -0.73
LIMK1-202ENST00000418310 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.73
LIMK1-202ENST00000418310 TMEM225BP0DP42 221 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 PRKACAP17612 351 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 PTGDSP41222 190 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 TAF9Q16594 264 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 TSPO2Q5TGU0 170 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 H3F3CQ6NXT2 135 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 URM1Q9BTM9 101 aaKnown RBP10.46□□□□□ -0.73
LIMK1-202ENST00000418310 FAM117AQ9C073 453 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 SLC2A8Q9NY64 477 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 TEX13DA0A0J9YY54 714 aaPredicted RBP10.46□□□□□ -0.73
LIMK1-202ENST00000418310 HPNP05981 417 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 NFYBP25208 207 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.73
LIMK1-202ENST00000418310 ZNF345Q14585 488 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 UBE2V2Q15819 145 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
LIMK1-202ENST00000418310 OR2A2Q6IF42 318 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 WDSUB1Q8N9V3 476 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 LYZL4Q96KX0 146 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 MRGPRX4Q96LA9 322 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 TLNRD1Q9H1K6 362 aa10.46□□□□□ -0.73
LIMK1-202ENST00000418310 CSNK1A1P48729 337 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 ACY1Q03154 408 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 SCRN3Q0VDG4 424 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 CLRN3Q8NCR9 226 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 OR2M3Q8NG83 312 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 OR5L2Q8NGL0 311 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 NUBPLQ8TB37 319 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 GPR132Q9UNW8 380 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 KNTC1P50748 2209 aa10.46□□□□□ -0.74
LIMK1-202ENST00000418310 SHANK1Q9Y566 2161 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 TMEM218A2RU14 115 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 LRP3O75074 770 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 ATG12O94817 140 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 RBM39Q14498 530 aaKnown RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PLXDC2Q6UX71 529 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 LDLRAD3Q86YD5 345 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 DTWD2Q8NBA8 298 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 OR56B1Q8NGI3 324 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PTX4Q96A99 478 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 CCDC74BQ96LY2 380 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 SPSB2Q99619 263 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 MLXQ9UH92 298 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 GPR179Q6PRD1 2367 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 BET1O15155 118 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 SFT2D2O95562 160 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PTGFRP43088 359 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 SPACA9Q96E40 222 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 ZNF2Q9BSG1 426 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 RTBDNQ9BSG5 229 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PIGMQ9H3S5 423 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 NPIPA2E9PIF3 369 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 NPIPA3F8WFD2 350 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 MED6O75586 246 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 SNAPC5O75971 98 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 CHRM2P08172 466 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 CCL3P10147 92 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 GLULP15104 373 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 NPBWR1P48145 328 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 P2RY4P51582 365 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 IAH1Q2TAA2 248 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 CCDC36Q8IYA8 594 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 AIFM2Q9BRQ8 373 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 PHF7Q9BWX1 381 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 GLS2Q9UI32 602 aa10.45□□□□□ -0.74
LIMK1-202ENST00000418310 MCTS1Q9ULC4 181 aaKnown RBP10.45□□□□□ -0.74
LIMK1-202ENST00000418310 DHRS7CA6NNS2 312 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 SIGLEC6O43699 453 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 ASCL1P50553 236 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 GPR85P60893 370 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 SLC25A47Q6Q0C1 308 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 DOK3Q7L591 496 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 PPP1R3BQ86XI6 285 aa10.44□□□□□ -0.74
LIMK1-202ENST00000418310 CADM4Q8NFZ8 388 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms