RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 IFNGR2P38484 337 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MNDAP41218 407 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 BDKRB1P46663 353 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC6A8P48029 635 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TNFSF10P50591 281 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TAS2R43P59537 309 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 DCDC1P59894 354 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ERVS71-1P61550 626 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 LMO4P61968 165 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MRPS10P82664 201 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 REEP5Q00765 189 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NAAAQ02083 359 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MGAT3Q09327 533 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NFATC2Q13469 925 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 UPP1Q16831 310 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF528Q3MIS6 628 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 C5orf47Q569G3 176 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NHLRC3Q5JS37 347 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ELFN2Q5R3F8 820 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CPTPQ5TA50 214 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ELP2Q6IA86 826 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR52W1Q6IF63 320 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAM166AQ6J272 317 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PRR27Q6MZM9 219 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 H3F3CQ6NXT2 135 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CNIH2Q6PI25 160 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SCIMPQ6UWF3 145 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PAMR1Q6UXH9 720 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF621Q6ZSS3 439 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMPRSS11FQ6ZWK6 438 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SSX9Q7RTT3 188 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MRPL21Q7Z2W9 205 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TSEN54Q7Z6J9 526 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 COMMD7Q86VX2 200 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PARGQ86W56 976 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SERPINA9Q86WD7 417 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 GID4Q8IVV7 300 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 LINC00518Q8N0U6 118 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 FGFRL1Q8N441 504 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAB42Q8N4Z0 105 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SPICQ8N5J4 248 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF557Q8N988 423 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NPEPL1Q8NDH3 523 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SDR9C7Q8NEX9 313 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR4M2Q8NGB6 313 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR10G8Q8NGN5 311 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2L8Q8NGY9 312 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR56B4Q8NH76 319 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CXorf40AQ8TE69 158 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SETD7Q8WTS6 366 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PIH1D2Q8WWB5 315 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NDRG1Q92597 394 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 GLYATL1Q969I3 302 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 UPRTQ96BW1 309 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ECHDC3Q96DC8 303 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MRPL53Q96EL3 112 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZBED6CLQ96FA7 236 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR4K3Q96R72 315 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 LYSMD1Q96S90 227 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 UTP23Q9BRU9 249 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR51J1Q9H342 316 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CWH43Q9H720 699 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ADAP2Q9NPF8 381 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 IFT46Q9NQC8 304 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PRSS16Q9NQE7 514 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 INPP5EQ9NRR6 644 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 UFSP2Q9NUQ7 469 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NLGN3Q9NZ94 848 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MYEF2Q9P2K5 600 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 EPHA6Q9UF33 1036 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 FBXL3Q9UKT7 428 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 POMT2Q9UKY4 750 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF346Q9UL40 294 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ABT1Q9ULW3 272 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NDRG2Q9UN36 371 aaKnown RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 GINS2Q9Y248 185 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 STARD10Q9Y365 291 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PRELID3BQ9Y3B1 194 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TSSC4Q9Y5U2 329 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PATJQ8NI35 1801 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 MCM3APO60318 1980 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 DOCK4Q8N1I0 1966 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 IGLV3-16A0A075B6K0 115 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 PPIAL4EA0A075B759 164 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRAPPC13A5PLN9 417 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ARHGEF33A8MVX0 844 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SNRPGP15A8MWD9 76 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 ATP6V1G2-DDX39BF2Z307 99 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 RNASEK-C17orf49H0YIS7 233 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GFYI3L273 518 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 M0R233 179 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 AIPO00170 330 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 CASKO14936 926 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 EMC8O43402 210 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 HCRTO43612 131 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 SH3BGRLO75368 114 aa3.07□□□□□ -1.92
HMGB3P23-201ENST00000414981 GCM2O75603 506 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms