RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MOB1AQ9H8S9 216 aa9.36□□□□□ -0.91
RFFL-204ENST00000414419 GPR84Q9NQS5 396 aa9.36□□□□□ -0.91
RFFL-204ENST00000414419 OPN4Q9UHM6 478 aa9.36□□□□□ -0.91
RFFL-204ENST00000414419 IGHV2-70DA0A0C4DH43 119 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 SNTNA6NMZ2 147 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 H3BNX3 289 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 CDIPTO14735 213 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 RGS9O75916 674 aaPredicted RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 GYPAP02724 150 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 OR2T7P0C7T2 308 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 MUC1P15941 1255 aaPredicted RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 PSMB10P40306 273 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 CSNK2BP67870 215 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 TMED1Q13445 227 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 WDR25Q64LD2 544 aaPredicted RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 RBMS3Q6XE24 437 aaKnown RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 OR10H4Q8NGA5 316 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 OR2T27Q8NH04 317 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 OR5P3Q8WZ94 311 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 NUDT16L1Q9BRJ7 211 aaKnown RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 C9orf16Q9BUW7 83 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 C19orf24Q9BVV8 132 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 PPP1R3EQ9H7J1 279 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 S100A14Q9HCY8 104 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 USE1Q9NZ43 259 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
RFFL-204ENST00000414419 ENPP5Q9UJA9 477 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 OR52A1Q9UKL2 312 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
RFFL-204ENST00000414419 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 R4GMQ9 66 aa9.35□□□□□ -0.91
RFFL-204ENST00000414419 IGHV3OR15-7A0A075B7D8 119 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 KIR2DS1A0A191URI9 304 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 TRIM77I1YAP6 450 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 TMPRSS2O15393 492 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 MAGEB4O15481 346 aaPredicted RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 ENSAO43768 121 aaKnown RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 DHRS3O75911 302 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 RPP14O95059 124 aaKnown RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 BAG2O95816 211 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 LHBP01229 141 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 PAX8Q06710 450 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 MFGE8Q08431 387 aaPredicted RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 ZBTB37Q5TC79 503 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 TEX36Q5VZQ5 186 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 PLEKHG7Q6ZR37 379 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 USP43Q70EL4 1123 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 MOB3CQ70IA8 216 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 SLC36A1Q7Z2H8 476 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 WDR86Q86TI4 376 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 C11orf53Q8IXP5 236 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 CBR4Q8N4T8 237 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 OR10Z1Q8NGY1 313 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 C22orf15Q8WYQ4 148 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 RPL3LQ92901 407 aaKnown RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 STMN2Q93045 179 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 EME1Q96AY2 570 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 HRASLS5Q96KN8 279 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 DNAJB11Q9UBS4 358 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 MRM2Q9UI43 246 aaKnown RBP9.34□□□□□ -0.91
RFFL-204ENST00000414419 NUP50Q9UKX7 468 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 PIGLQ9Y2B2 252 aa9.34□□□□□ -0.91
RFFL-204ENST00000414419 A0A1W2PQL4 384 aaPredicted RBP9.33□□□□□ -0.92
RFFL-204ENST00000414419 METTL15A6NJ78 407 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 SULT1C4O75897 302 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 VENTXO95231 258 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 APOL3O95236 402 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 TTRP02766 147 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 LIPFP07098 398 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 PPIAL4GP0DN37 164 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 EGR1P18146 543 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 CFHR2P36980 270 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 MTNR1AP48039 350 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 GPM6AP51674 278 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 GMFBP60983 142 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 GNG3P63215 75 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 CEACAM21Q3KPI0 293 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 MEDAGQ5VYS4 303 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 PLCXD3Q63HM9 321 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ZNF841Q6ZN19 808 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ZBTB49Q6ZSB9 765 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 FAM220AQ7Z4H9 259 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ELMOD2Q8IZ81 293 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 PNLDC1Q8NA58 520 aaKnown RBP9.33□□□□□ -0.92
RFFL-204ENST00000414419 SCCPDHQ8NBX0 429 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 OR5A2Q8NGI9 324 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ZNF671Q8TAW3 534 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 SLC6A7Q99884 636 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 ADI1Q9BV57 179 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 MS4A7Q9GZW8 240 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms