RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SMIM17P0DL12 118 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PSG2P11465 335 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 TDGF1P13385 188 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 HSD17B1P14061 328 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ABOP16442 354 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MGMTP16455 207 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 S100A2P29034 98 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 BRS3P32247 399 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 NKX2-1P43699 371 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GLIPR1P48060 266 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF133P52736 654 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 XGP55808 180 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 HILS1P60008 231 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RPS28P62857 69 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RPL31P62899 125 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 HIST1H3AP68431 136 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PITX1P78337 314 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 H3F3AP84243 136 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ID2Q02363 134 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CD164Q04900 197 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MXD1Q05195 221 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FABP9Q0Z7S8 132 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CRHR2Q13324 411 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 EBPQ15125 230 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PMVKQ15126 192 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RBMS2Q15434 407 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 NEDD8Q15843 81 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ST3GAL2Q16842 350 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 C4orf26Q17RF5 130 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 LRRC26Q2I0M4 334 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MORN2Q502X0 79 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 TRMT12Q53H54 448 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 TREML2Q5T2D2 321 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 C1orf194Q5T5A4 169 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FAM102AQ5T9C2 384 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OTPQ5XKR4 325 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 KDM4DQ6B0I6 523 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 DMKNQ6E0U4 476 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ZFAND6Q6FIF0 208 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SPSB3Q6PJ21 355 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PQLC2Q6ZP29 291 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 HIST2H3AQ71DI3 136 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 NAA40Q86UY6 237 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 UMODL1-AS1Q8N2C9 162 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MS4A15Q8N5U1 240 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR11H4Q8NGC9 324 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR4N2Q8NGD1 307 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR6T1Q8NGN1 323 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR4C13Q8NGP0 309 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR5M9Q8NGP3 310 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR13C8Q8NGS7 320 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR14A16Q8NHC5 309 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SLC38A5Q8WUX1 472 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PCNPQ8WW12 178 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CYGBQ8WWM9 190 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CRYGNQ8WXF5 182 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ARL11Q969Q4 196 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM159Q96B96 161 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 UPRTQ96BW1 309 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RSPRY1Q96DX4 576 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CCDC126Q96EE4 140 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ZC3HAV1LQ96H79 300 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ADGRG7Q96K78 797 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SLC35G5Q96KT7 338 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 LINC00052Q96N35 136 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OXGR1Q96P68 337 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GFM1Q96RP9 751 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ATOH8Q96SQ7 321 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SORT1Q99523 831 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CDX2Q99626 313 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GFI1Q99684 422 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CABLES2Q9BTV7 478 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 EFCAB11Q9BUY7 163 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FAIM2Q9BWQ8 316 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SUCNR1Q9BXA5 334 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 C20orf85Q9H1P6 137 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 Q9H521 79 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FNDC4Q9H6D8 234 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RETNQ9HD89 108 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ENY2Q9NPA8 101 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 B3GAT2Q9NPZ5 323 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PLSCR3Q9NRY6 295 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 STARD5Q9NSY2 213 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FAM49BQ9NUQ9 324 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RBFOX1Q9NWB1 397 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SCN3BQ9NY72 215 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SIGLEC8Q9NYZ4 499 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MUTYHQ9UIF7 546 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PACSIN3Q9UKS6 424 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 LAMP3Q9UQV4 416 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 KLHDC2Q9Y2U9 406 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PCYT1BQ9Y5K3 369 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 TROQ12816 1431 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MLH3Q9UHC1 1453 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 NRXN1Q9ULB1 1477 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PCM1Q15154 2024 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TRAV18A0A075B6X5 111 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 A0A1B0GX51 115 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms