RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 A0A087WUU8 490 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 A0A087X0K7 114 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 HMGN4O00479 90 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 PLPP1O14494 284 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 P2RX6O15547 441 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SGCEO43556 437 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 RBMXL2O75526 392 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 NDUFB6O95139 128 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 KLK1P06870 262 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CD33P20138 364 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 FPR3P25089 353 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 MPGP29372 298 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CMPK1P30085 196 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CFHR2P36980 270 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 HERV-K104P63124 156 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 ALKBH1Q13686 389 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 MRPL23Q16540 153 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 C14orf28Q4W4Y0 310 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 ACSM3Q53FZ2 586 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 AVPI1Q5T686 147 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 OR51G2Q8NGK0 314 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 OR6X1Q8NH79 312 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 Q96M66 194 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 MAP3K3Q99759 626 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 TCEAL7Q9BRU2 100 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 LMF2Q9BU23 707 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 PCBD2Q9H0N5 130 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SLC22A11Q9NSA0 550 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 MYOTQ9UBF9 498 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RAB29O14966 203 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PRKRAO75569 313 aaKnown RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 S100PP25815 95 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 FAUP35544 74 aaKnown RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MPLP40238 635 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MNDAP41218 407 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 CCL11P51671 97 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 E2F1Q01094 437 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 NAAAQ02083 359 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 CFHR1Q03591 330 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 ST3GAL3Q11203 375 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 CLEC12AQ5QGZ9 265 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 GUSBP11Q6P575 273 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 SIGLEC15Q6ZMC9 328 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MEPCEQ7L2J0 689 aaKnown RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PRSS45Q7RTY3 260 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 VN1R4Q7Z5H5 301 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TGIF2LXQ8IUE1 241 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 OR2T33Q8NG76 320 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 C22orf15Q8WYQ4 148 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RAB8BQ92930 207 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 UBE2E3Q969T4 207 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MSI2Q96DH6 328 aaKnown RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MS4A10Q96PG2 267 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RASL10BQ96S79 203 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 NICN1Q9BSH3 213 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MRI1Q9BV20 369 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PELI2Q9HAT8 420 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 BCL2L10Q9HD36 194 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 KRCC1Q9NPI7 259 aaPredicted RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 LHX9Q9NQ69 397 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PPP1R3CQ9UQK1 317 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 SLC22A13Q9Y226 551 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MMACHCQ9Y4U1 282 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 ANKRD20A5PA0PJZ0 165 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM213A2RRL7 107 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM218A2RU14 115 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RFPL4AA6NLU0 287 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 C17orf100A8MU93 164 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RFPL4AL1F8VTS6 287 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 SLC2A1P11166 492 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 ATF1P18846 271 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TAS2R41P59536 307 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TAS2R60P59551 318 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 KIR2DS3Q14952 304 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM255AQ5JRV8 349 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 FAM27D1Q5T7N8 215 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PRSS41Q7RTY9 318 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PPP1R32Q7Z5V6 425 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 OOSP2Q86WS3 158 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 OR6T1Q8NGN1 323 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 OR4Q3Q8NH05 313 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 NANPQ8TBE9 248 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 FAM222BQ8WU58 562 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 FBXO17Q96EF6 278 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 WFDC6Q9BQY6 131 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 GINS4Q9BRT9 223 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 PTDSS2Q9BVG9 487 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 RSPO3Q9BXY4 272 aaPredicted RBP8.3□□□□□ -1.08
SNHG3-201ENST00000413987 MS4A8Q9BY19 250 aa8.3□□□□□ -1.08
SNHG3-201ENST00000413987 IGHV5-51A0A0C4DH38 117 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 LY6G6EA0A0G2JKS1 128 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 J3QL48 77 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 CTNSO60931 367 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms