RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 NUDT16L1Q9BRJ7 211 aaKnown RBP15.83■□□□□ 0.12
SF3A1-202ENST00000411423 MROQ9BYG7 248 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 PRRG3Q9BZD7 231 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 HAO2Q9NYQ3 351 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 IKZF2Q9UKS7 526 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 NUP50Q9UKX7 468 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 TRAV38-1A0A0B4J264 116 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 A0A0U1RQV5 110 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 DCTDP32321 178 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 GNALP38405 381 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 MZT1Q08AG7 82 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF322Q6U7Q0 402 aaPredicted RBP15.82■□□□□ 0.12
SF3A1-202ENST00000411423 CCDC121Q6ZUS5 278 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 ASB17Q8WXJ9 295 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 UPRTQ96BW1 309 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 FAM71F1Q96KD3 344 aaPredicted RBP15.82■□□□□ 0.12
SF3A1-202ENST00000411423 TECTBQ96PL2 329 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 TBX5Q99593 518 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 RNPEPL1Q9HAU8 725 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 GPR84Q9NQS5 396 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 CLN6Q9NWW5 311 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 MPC1Q9Y5U8 109 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 TMEM14AQ9Y6G1 99 aa15.82■□□□□ 0.12
SF3A1-202ENST00000411423 ACOD1A6NK06 481 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 EI24O14681 340 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF254O75437 659 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 ALPLP05186 524 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 RIDAP52758 137 aaKnown RBP15.81■□□□□ 0.12
SF3A1-202ENST00000411423 IL5RAQ01344 420 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 FAM76BQ5HYJ3 339 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 DOCK11Q5JSL3 2073 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 GID4Q8IVV7 300 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 BPIFB2Q8N4F0 458 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 SIGLECL1Q8N7X8 197 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 EME1Q96AY2 570 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 C1orf147Q96MC9 270 aaPredicted RBP15.81■□□□□ 0.12
SF3A1-202ENST00000411423 MICU1Q9BPX6 476 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 WDR13Q9H1Z4 485 aa15.81■□□□□ 0.12
SF3A1-202ENST00000411423 H2AFY2Q9P0M6 372 aaPredicted RBP15.81■□□□□ 0.12
SF3A1-202ENST00000411423 NUFIP1Q9UHK0 495 aaKnown RBP15.81■□□□□ 0.12
SF3A1-202ENST00000411423 A0A1B0GTI1 187 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SRRM5B3KS81 715 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SELLP14151 372 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 HTR1FP30939 366 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 CFHR2P36980 270 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 GMFBP60983 142 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 FGF12P61328 243 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SCGB2A2Q13296 93 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 WDR38Q5JTN6 314 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 CEP78Q5JTW2 689 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF684Q5T5D7 378 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 BTNL3Q6UXE8 466 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 ZDHHC23Q8IYP9 409 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SCCPDHQ8NBX0 429 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 RNF170Q96K19 258 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 CCL13Q99616 98 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 RBM4BQ9BQ04 359 aaKnown RBP15.8■□□□□ 0.12
SF3A1-202ENST00000411423 RTL8AQ9BWD3 113 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SUCNR1Q9BXA5 334 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 ERVK-18Q9QC07 812 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF391Q9UJN7 358 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 SLC22A13Q9Y226 551 aa15.8■□□□□ 0.12
SF3A1-202ENST00000411423 TRAV40A0A0B4J280 105 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF816-ZNF321PA0A0X1KG74 233 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 A0A1W2PQL4 384 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ANXA2P2A6NMY6 339 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF670-ZNF695F2Z2N8 137 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 DVL1O14640 695 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 RHBDL1O75783 438 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 PLATP00750 562 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 SFTPBP07988 381 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 PPIAL4GP0DN37 164 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 FAHP16930 419 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 MAP2K3P46734 347 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 GPM6AP51674 278 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF829Q3KNS6 432 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ZIK1Q3SY52 487 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-202ENST00000411423 FAM216BQ8N7L0 139 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 OR5T2Q8NGG2 359 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 FAM81AQ8TBF8 368 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 RNF166Q96A37 237 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-202ENST00000411423 MBOAT4Q96T53 435 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 SNTG1Q9NSN8 517 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 USE1Q9NZ43 259 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 KAAG1Q9UBP8 84 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 AASSQ9UDR5 926 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 WARS2Q9UGM6 360 aaKnown RBP15.79■□□□□ 0.12
SF3A1-202ENST00000411423 ENOPH1Q9UHY7 261 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 R4GMQ9 66 aa15.79■□□□□ 0.12
SF3A1-202ENST00000411423 MDFIC2A0A1B0GVS7 189 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 TMEM210A6NLX4 147 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 LOC110117498-PIK3R3F6TDL0 507 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 AKR7A2O43488 359 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 MMP9P14780 707 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 NPY4RP50391 375 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 KCNJ8Q15842 424 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 STUMQ69YW2 141 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 KCTD8Q6ZWB6 473 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 COMMD2Q86X83 199 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 ELMOD2Q8IZ81 293 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms