RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 RAP2BP61225 183 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 NKPD1Q17RQ9 610 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 SCGB2B2Q4G0G5 96 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 C4orf46Q504U0 113 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 ATPAF1Q5TC12 328 aaPredicted RBP17.54■□□□□ 0.4
USP39-204ENST00000409766 TUSC5Q8IXB3 177 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 DEFB124Q8NES8 71 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 FNDC9Q8TBE3 224 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 CCDC107Q8WV48 283 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 PIGTQ969N2 578 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 PRRT1Q99946 306 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 PARPBPQ9NWS1 579 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 MCTS1Q9ULC4 181 aaKnown RBP17.54■□□□□ 0.4
USP39-204ENST00000409766 FARS2O95363 451 aaKnown RBP17.54■□□□□ 0.4
USP39-204ENST00000409766 CSN2P05814 226 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 S100A1P23297 94 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 CD82P27701 267 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 GNG2P59768 71 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 PPIAP62937 165 aaKnown RBP17.54■□□□□ 0.4
USP39-204ENST00000409766 CXADRP78310 365 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 C2orf68Q2NKX9 166 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 ZFP62Q8NB50 900 aaPredicted RBP17.54■□□□□ 0.4
USP39-204ENST00000409766 OR2AK2Q8NG84 335 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 TNFAIP8L1Q8WVP5 186 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 ANAPC10Q9UM13 185 aa17.54■□□□□ 0.4
USP39-204ENST00000409766 ARGFXA6NJG6 315 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 CDRT15L2A8MXV6 281 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 MFNGO00587 321 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 OR4E1P0C645 316 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 FTH1P19P0C7X4 201 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 TBPP20226 339 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 HRH1P35367 487 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 UBE2MP61081 183 aaKnown RBP17.53■□□□□ 0.4
USP39-204ENST00000409766 RIPPLY1Q0D2K3 151 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 TCF15Q12870 199 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 ZMYND11Q15326 602 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 MRGPRFQ96AM1 343 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 WDR89Q96FK6 387 aaPredicted RBP17.53■□□□□ 0.4
USP39-204ENST00000409766 ARHGAP5-AS1Q96IT6 56 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 BCO1Q9HAY6 547 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 EIF3KQ9UBQ5 218 aaKnown RBP17.53■□□□□ 0.4
USP39-204ENST00000409766 ZNF391Q9UJN7 358 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 PLEKHA6Q9Y2H5 1048 aa17.53■□□□□ 0.4
USP39-204ENST00000409766 FOXI3A8MTJ6 420 aaPredicted RBP17.52■□□□□ 0.4
USP39-204ENST00000409766 RPL36A-HNRNPH2H7BZ11 118 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 RAD51DO75771 328 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 TPOP07202 933 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 CD46P15529 392 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 MGMTP16455 207 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 H2BFSP57053 126 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 PNLIPRP3Q17RR3 467 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 ZNF767PQ75MW2 155 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 TMED4Q7Z7H5 227 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 OR51T1Q8NGJ9 327 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 SNAPC3Q92966 411 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 RNF122Q9H9V4 155 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 CALHM2Q9HA72 323 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 ACKR4Q9NPB9 350 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 GPR173Q9NS66 373 aa17.52■□□□□ 0.4
USP39-204ENST00000409766 ZNF724A8MTY0 619 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 TSC22D2O75157 780 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 NAT1P18440 290 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 SOX8P57073 446 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 ARF1P84077 181 aaKnown RBP17.52■□□□□ 0.39
USP39-204ENST00000409766 STK11Q15831 433 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.52■□□□□ 0.39
USP39-204ENST00000409766 FAM109AQ8N4B1 249 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 SPSB1Q96BD6 273 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 CYYR1Q96J86 154 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 RGCCQ9H4X1 137 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 HEXA-AS1Q9H8Q6 139 aa17.52■□□□□ 0.39
USP39-204ENST00000409766 SPAARA0A1B0GVQ0 90 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 H3BUI4 141 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 PABPC1L2AQ5JQF8 200 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 UXS1Q8NBZ7 420 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 CPEB3Q8NE35 698 aaKnown RBP17.51■□□□□ 0.39
USP39-204ENST00000409766 OR10K1Q8NGX5 313 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 TM2D1Q9BX74 207 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP39-204ENST00000409766 VSIG4Q9Y279 399 aa17.51■□□□□ 0.39
USP39-204ENST00000409766 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
USP39-204ENST00000409766 OR6C65A6NJZ3 312 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 ACTL6AO96019 429 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 SERPINA2P20848 420 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 PER3P56645 1201 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 DHODHQ02127 395 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 SLC10A1Q14973 349 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 FTMTQ8N4E7 242 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 STEAP2Q8NFT2 490 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 S100A13Q99584 98 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 OCSTAMPQ9BR26 566 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 PRRG4Q9BZD6 226 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 B3GNT2Q9NY97 397 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 OPN4Q9UHM6 478 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 LIPGQ9Y5X9 500 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 LRP3O75074 770 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 SIX6O95475 246 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 ZNF81P51508 661 aa17.5■□□□□ 0.39
USP39-204ENST00000409766 MTCP1P56278 107 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms