RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MNTQ99583 582 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 SMURF1Q9HCE7 757 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 COPS3Q9UNS2 423 aa16.28■□□□□ 0.2
TSPAN4-209ENST00000409543 IGHV3OR16-10A0A075B7F0 116 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 TRAV40A0A0B4J280 105 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 PRR32B1ATL7 298 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 M0R129 80 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 CDIPTO14735 213 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 MAP2K3P46734 347 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 MTNR1AP48039 350 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 POU4F2Q12837 409 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 FAM76BQ5HYJ3 339 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 BCDIN3DQ7Z5W3 292 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 PNLDC1Q8NA58 520 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 FAM81AQ8TBF8 368 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 PIGCQ92535 297 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 C12orf43Q96C57 262 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 PKP2Q99959 881 aa16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 ZMAT3Q9HA38 289 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-209ENST00000409543 ZNF816-ZNF321PA0A0X1KG74 233 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 SRRM5B3KS81 715 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ZNF879B4DU55 563 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 DVL1O14640 695 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 TMPRSS2O15393 492 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 FCN3O75636 299 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 CIB2O75838 187 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ECDO95905 644 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ATP6V1B1P15313 513 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 PRTN3P24158 256 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 RIDAP52758 137 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 BAMBIQ13145 260 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ZNF829Q3KNS6 432 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ZDHHC23Q8IYP9 409 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 OR10Z1Q8NGY1 313 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 HPSE2Q8WWQ2 592 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 CENPNQ96H22 339 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 RNF170Q96K19 258 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 HIST1H2AAQ96QV6 131 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 IL4I1Q96RQ9 567 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 CIB1Q99828 191 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 PBOV1Q9GZY1 135 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 ADGRL4Q9HBW9 690 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 HAO2Q9NYQ3 351 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 IKZF2Q9UKS7 526 aa16.26■□□□□ 0.19
TSPAN4-209ENST00000409543 DNAJC9-AS1A6NH13 148 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 IGLV3-1P01715 115 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 CFPP27918 469 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 BPIFB3P59826 476 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 WDR38Q5JTN6 314 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 ZNF322Q6U7Q0 402 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 KCTD8Q6ZWB6 473 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 BTN2A1Q7KYR7 527 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 GID4Q8IVV7 300 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 SLC35F2Q8IXU6 374 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 SCCPDHQ8NBX0 429 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 RPL3LQ92901 407 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 C1orf147Q96MC9 270 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 CCL13Q99616 98 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 FGF23Q9GZV9 251 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 CLN6Q9NWW5 311 aa16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 NUFIP1Q9UHK0 495 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-209ENST00000409543 CLDN34H7C241 214 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 P2RY10O00398 339 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 MMP9P14780 707 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 CXCR4P61073 352 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 ACTR3P61158 418 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 ATPAF1Q5TC12 328 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 GPR157Q5UAW9 335 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 ASRGL1Q7L266 308 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 SLC36A1Q7Z2H8 476 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 OR51E1Q8TCB6 317 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 SEH1LQ96EE3 360 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 WDFY2Q96P53 400 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 PCGF1Q9BSM1 259 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 GABARAPL3Q9BY60 117 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 TTTY10Q9BZA0 68 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 GPR84Q9NQS5 396 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 OAZ3Q9UMX2 235 aa16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 SOX21Q9Y651 276 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-209ENST00000409543 ZNF670-ZNF695F2Z2N8 137 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 SRSF10O75494 262 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 TOX4O94842 621 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 SFTPBP07988 381 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 POLR2IP36954 125 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 ELF3P78545 371 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 EGR3Q06889 387 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 MFGE8Q08431 387 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 RIPPLY1Q0D2K3 151 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 CEACAM21Q3KPI0 293 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 ZBTB37Q5TC79 503 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 METTL11BQ5VVY1 283 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 STUMQ69YW2 141 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 THAP5Q7Z6K1 395 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 COMMD2Q86X83 199 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 ST8SIA4Q92187 359 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 PPP1R14AQ96A00 147 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 FAM71F1Q96KD3 344 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms