RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 AKIRIN1Q9H9L7 192 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 B3GALT5Q9Y2C3 310 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SPAG17Q6Q759 2223 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 IGLV3-19P01714 112 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PRB1P04280 392 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FPR3P25089 353 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 ADARB1P78563 741 aaKnown RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 NAAAQ02083 359 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SHEQ5VZ18 495 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 RPL7L1Q6DKI1 246 aaKnown RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FA2HQ7L5A8 372 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SERPINA11Q86U17 422 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 TMEM139Q8IV31 216 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 CMTM2Q8TAZ6 248 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 EMG1Q92979 244 aaKnown RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 GHITMQ9H3K2 345 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PLEKHJ1Q9NW61 149 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PILRAQ9UKJ1 303 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 AMMECR1Q9Y4X0 333 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FZD6O60353 706 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PMS2P2O95744 297 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PMCHP20382 165 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SLC35B1P78383 322 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 RGNQ15493 299 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PLA1AQ53H76 456 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 LCN8Q6JVE9 175 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 KIRREL2Q6UWL6 708 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 NPSR1Q6W5P4 371 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FAM216AQ8WUB2 273 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 ALG14Q96F25 216 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 UBQLN3Q9H347 655 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 OSGIN1Q9UJX0 560 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 RNF24Q9Y225 148 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 AP4M1O00189 453 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FRS3O43559 492 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 TCRBP04435 133 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 ACAA1P09110 424 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 GFRA1P56159 465 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SEC61A1P61619 476 aaKnown RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 GPR50Q13585 617 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 MPEG1Q2M385 716 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 CEACAM16Q2WEN9 425 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 FAM74A1Q5RGS3 127 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 DCAF12L2Q5VW00 463 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF787Q6DD87 383 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 NPEPL1Q8NDH3 523 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 OR13F1Q8NGS4 319 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 OR2G3Q8NGZ4 309 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SLC35B4Q969S0 331 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SCMH1Q96GD3 660 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 C19orf43Q9BQ61 176 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 GLIPR2Q9H4G4 154 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 TMEM200CA6NKL6 621 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 E9PLN8 166 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 MPIG6BO95866 241 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PIPP12273 146 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 G6PCP35575 357 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 HTR6P50406 440 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 CCR6P51684 374 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 UBE2G1P62253 170 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 AGERQ15109 404 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SMUG1Q53HV7 270 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 OR6K3Q8NGY3 331 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 MUL1Q969V5 352 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 GPR137Q96N19 417 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 SPNS1Q9H2V7 528 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 HEXA-AS1Q9H8Q6 139 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 MED17Q9NVC6 651 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 DLL3Q9NYJ7 618 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 DOK5Q9P104 306 aa6.54□□□□□ -1.36
SCN9A-202ENST00000409435 PLEKHB1Q9UF11 243 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-202ENST00000409435 TRAV38-1A0A0B4J264 116 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 PROB1E7EW31 1015 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 SLC25A6P12236 298 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 CXCR4P61073 352 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 ZXDBP98169 803 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 NHLH2Q02577 135 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 TOMM34Q15785 309 aaPredicted RBP6.53□□□□□ -1.36
SCN9A-202ENST00000409435 ENTPD8Q5MY95 495 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 LINC00299Q6ZSB3 139 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 PPP1R32Q7Z5V6 425 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 UBE3DQ7Z6J8 389 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 IGDCC3Q8IVU1 814 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 CADM3Q8N126 398 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 ZFP62Q8NB50 900 aaPredicted RBP6.53□□□□□ -1.36
SCN9A-202ENST00000409435 OR13G1Q8NGZ3 307 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 GPR148Q8TDV2 347 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 HES4Q9HCC6 221 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 FAM60AQ9NP50 221 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 MTCH1Q9NZJ7 389 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 RAB22AQ9UL26 194 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 MCRIP1C9JLW8 97 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 H3BVH4 76 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 JTBO76095 146 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 AADACP22760 399 aa6.53□□□□□ -1.36
SCN9A-202ENST00000409435 OMGP23515 440 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms