RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 THRBP10828 461 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 TNFRSF1BP20333 461 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 PMELP40967 661 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 PRRX1P54821 245 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 DEFA5Q01523 94 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 MPPED2Q15777 294 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 MS4A18Q3C1V0 323 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 FAM74A1Q5RGS3 127 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 CARD17Q5XLA6 110 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 ULK3Q6PHR2 472 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 DNM1P46Q6ZS02 220 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 SLC16A14Q7RTX9 510 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 MRPL52Q86TS9 123 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 MUC15Q8N387 334 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 GPR137CQ8N3F9 429 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 C17orf78Q8N4C9 275 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 NEK7Q8TDX7 302 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 CORO2AQ92828 525 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 BCL2L2Q92843 193 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 FAM210BQ96KR6 192 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 OR2M2Q96R28 347 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 ZNF607Q96SK3 696 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 ZNF2Q9BSG1 426 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 EMC6Q9BV81 110 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 SPATA5L1Q9BVQ7 753 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 RIBC2Q9H4K1 309 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 DUSP21Q9H596 190 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 MED29Q9NX70 200 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 TESQ9UGI8 421 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 CORO2BQ9UQ03 480 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 ANGPT4Q9Y264 503 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 AMDHD2Q9Y303 409 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 ATP23Q9Y6H3 246 aa8.39□□□□□ -1.07
NIF3L1-202ENST00000409020 IGHV4-30-2A0A087WSY4 118 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TRDCB7Z8K6 153 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 PTGES3LE9PB15 166 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 SIGLEC5O15389 551 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 WBP4O75554 376 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 HLA-DQB1P01920 261 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 IGFBP1P08833 259 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 SPARCP09486 303 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ZNF43P17038 809 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TNFSF8P32971 234 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 MAP2K3P46734 347 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 FABP6P51161 128 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ZNF81P51508 661 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ARF1P84077 181 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TSPAN31Q12999 210 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 DAG1Q14118 895 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 OR8G1Q15617 311 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 KRTAP21-3Q3LHN1 58 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 LCN1P1Q5VSP4 162 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 CD276Q5ZPR3 534 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 LCN8Q6JVE9 175 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ACSM5Q6NUN0 579 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 LPCAT3Q6P1A2 487 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 NHLRC1Q6VVB1 395 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 H1FNTQ75WM6 255 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 PDZD9Q8IXQ8 264 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 FAM185AQ8N0U4 392 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 TMEM123Q8N131 208 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 OR4K15Q8NH41 348 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 CANT1Q8WVQ1 401 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 GCDHQ92947 438 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 RHOVQ96L33 236 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 NOL4LQ96MY1 436 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 MCHR1Q99705 422 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 C11orf54Q9H0W9 315 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 RBFOX1Q9NWB1 397 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 ERVK13-1Q9NX77 482 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 SCN3BQ9NY72 215 aa8.38□□□□□ -1.07
NIF3L1-202ENST00000409020 SERTM2A0A1B0GWG4 89 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 PRORSD1PA6NEY8 169 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 IGHV2-5P01817 119 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 LPLP06858 475 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 STAG3L3P0CL85 134 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 PSMB9P28065 219 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 MSX2P35548 267 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 MAGEA2P43356 314 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 LIMS1P48059 325 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 PRPS1P60891 318 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 POU3F1Q03052 451 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 C1DQ13901 141 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 DGCR6Q14129 220 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 MST1LQ2TV78 715 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 AKIRIN2Q53H80 203 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 ENTPD8Q5MY95 495 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 GLYATQ6IB77 296 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 ETFRF1Q6IPR1 90 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 LINC00114Q6XXX2 140 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 PRIMA1Q86XR5 153 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 BBS1Q8NFJ9 593 aa8.37□□□□□ -1.07
NIF3L1-202ENST00000409020 LIPHQ8WWY8 451 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 389.2 ms