RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TRBV5-5A0A0J9YX44 114 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ANKRD20A5PA0PJZ0 165 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF732B4DXR9 585 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 MSTNO14793 375 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ST8SIA3O43173 380 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PHF1O43189 567 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 KLK10O43240 276 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 MPZL1O95297 269 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 GRPP07492 148 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SP1P08047 785 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SPNP16150 400 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 GNB3P16520 340 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 EPHA1P21709 976 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SLC6A1P30531 599 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SSTR2P30874 369 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 NUBP1P53384 320 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 MPPED2Q15777 294 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 LINC00303Q3SY05 128 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM27BQ5VT28 67 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SLC22A25Q6T423 547 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF687Q8N1G0 1237 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 OR8B12Q8NGG6 310 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SCARB1Q8WTV0 552 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ASB5Q8WWX0 329 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TCEAL3Q969E4 200 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SEC22AQ96IW7 307 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ABHD1Q96SE0 405 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 DDOQ99489 341 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF2Q9BSG1 426 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 NMNAT2Q9BZQ4 307 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM212BQ9NTI7 297 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ASF1BQ9NVP2 202 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 CACFD1Q9UGQ2 172 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 KNTC1P50748 2209 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 CNTRLQ7Z7A1 2325 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SCN3AQ9NY46 2000 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 A0A1B0GTH9 108 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ATP6V1G2-DDX39BF2Z307 99 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SCAF4O95104 1147 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 MT-CO2P00403 227 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 COX6A1P12074 109 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 FPR2P25090 351 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 HRH1P35367 487 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PTGER4P35408 488 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 HBG1P69891 147 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 HBG2P69892 147 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PEA15Q15121 130 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ELP2Q6IA86 826 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 HAGHLQ6PII5 290 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SLC25A47Q6Q0C1 308 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 UNQ9370/PRO34162Q6UXP9 181 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 LINC00114Q6XXX2 140 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ACOT7LQ6ZUV0 252 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 KANSL1Q7Z3B3 1105 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SPICQ8N5J4 248 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF519Q8TB69 540 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 C22orf15Q8WYQ4 148 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 KCNK17Q96T54 332 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 EIF5A2Q9GZV4 153 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 GPR35Q9HC97 309 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 GPR27Q9NS67 375 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM100Q9NV29 134 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM38BQ9NVV0 291 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SF3B6Q9Y3B4 125 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 A0A0J9YW62 118 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 A0A1W2PPH5 198 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 NUDT19A8MXV4 375 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 KRBOX1C9JBD0 128 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 DFFBO76075 338 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZIC2O95409 532 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 RECKO95980 971 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 APOC3P02656 99 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 IL3RAP26951 378 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PSMB6P28072 239 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 DUSP1P28562 367 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 MPGP29372 298 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 HAAOP46952 286 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 LUMP51884 338 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TAGLNQ01995 201 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF266Q14584 549 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM128Q5BJH2 165 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SIGIRRQ6IA17 410 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SPINK14Q6IE38 97 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 FAHD2BQ6P2I3 314 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 VHLLQ6RSH7 139 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TMUB2Q71RG4 321 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 COMTD1Q86VU5 262 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 C1orf87Q8N0U7 546 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 BHLHE23Q8NDY6 225 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM185AQ8NFB2 350 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 CD300LFQ8TDQ1 290 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 RNF141Q8WVD5 230 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 FAHD2AQ96GK7 314 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 C2orf50Q96LR7 162 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 USB1Q9BQ65 265 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 SUCNR1Q9BXA5 334 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 GSX2Q9BZM3 304 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PPP1R3EQ9H7J1 279 aa4.2□□□□□ -1.74
PCDH11X-207ENST00000406881 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms