RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF547Q8IVP9 402 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 C17orf78Q8N4C9 275 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 MREGQ8N565 214 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 NPWQ8N729 165 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR6Q1Q8NGQ2 317 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 LINC01006Q8NI28 216 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 C22orf15Q8WYQ4 148 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 RPEQ96AT9 228 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM3DQ96BQ1 224 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 HOPXQ9BPY8 73 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 COPS4Q9BT78 406 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TM6SF2Q9BZW4 377 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 NAA50Q9GZZ1 169 aaKnown RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ALX4Q9H161 411 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 PLSCR3Q9NRY6 295 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 GID8Q9NWU2 228 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC25A37Q9NYZ2 338 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 IFNKQ9P0W0 207 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF629Q9UEG4 869 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TRAPPC4Q9Y296 219 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 NDUFAF1Q9Y375 327 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TSSC4Q9Y5U2 329 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 V9GYQ6 96 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 NCAPD3P42695 1498 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARHGAP23Q9P227 1491 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 A8MU10 97 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 CCRL2O00421 344 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TCAPO15273 167 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 EMC8O43402 210 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TDP2O95551 362 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 BGLAPP02818 100 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC35E2BP0CK96 405 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ADRB3P13945 408 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF30P17039 623 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZBTB25P24278 435 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 F2RP25116 425 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ELK4P28324 431 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 NUDT1P36639 197 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 CLDN6P56747 220 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF121P58317 390 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 AP1S1P61966 158 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 RELAQ04206 551 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 UNC119Q13432 240 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 PSG3Q16557 428 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 C5orf47Q569G3 176 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM255AQ5JRV8 349 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 WDR82Q6UXN9 313 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF621Q6ZSS3 439 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2W3Q7Z3T1 314 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 SNX20Q7Z614 316 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 VKORC1L1Q8N0U8 176 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 LRRC18Q8N456 261 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 KIF2BQ8N4N8 673 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR52E2Q8NGJ4 325 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR4S2Q8NH73 311 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2V1Q8NHB1 315 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 BORCS5Q969J3 196 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 YIPF5Q969M3 257 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TAMM41Q96BW9 452 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 SEH1LQ96EE3 360 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2M2Q96R28 347 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 C12orf57Q99622 126 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRRT1Q99946 306 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 MICU1Q9BPX6 476 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM109Q9BVC6 243 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 METTL9Q9H1A3 318 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 KIR3DX1Q9H7L2 352 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 WDR54Q9H977 334 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ABCB9Q9NP78 766 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2S2Q9NQN1 319 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 STMN3Q9NZ72 180 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 RWDD2AQ9UIY3 292 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 TP53TG5Q9Y2B4 290 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 ASB4Q9Y574 426 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 HEBP2Q9Y5Z4 205 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 KIF25-AS1Q9Y6Z4 181 aa3.39□□□□□ -1.87
HMGB1P13-201ENST00000406019 EIF3AQ14152 1382 aaKnown RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 CENPXA8MT69 81 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 H3BN98 237 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 NME4O00746 187 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 AQP9O43315 295 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 EIF1BO60739 113 aaKnown RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC19A2O60779 497 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 DEXIO95424 95 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 HPRT1P00492 218 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 TNNC2P02585 160 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZDHHC11BP0C7U3 371 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 DNAH10OSP0CZ25 163 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 GGT1P19440 569 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 ME2P23368 584 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms