RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MYEF2Q9P2K5 600 aaKnown RBP13.23□□□□□ -0.29
COL25A1-201ENST00000399126 STEAP1Q9UHE8 339 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 A0A096LPE4 126 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 TRAV17A0A0B4J275 112 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 A0A1B0GVI7 797 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 A0A1W2PPZ6 126 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 RPS10-NUDT3A0A1W2PQS6 291 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 A6NLC8 198 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 SGCEO43556 437 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 GFRA3O60609 400 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 CD3GP09693 182 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 SRP9P49458 86 aaKnown RBP13.23□□□□□ -0.29
COL25A1-201ENST00000399126 SNAI3Q3KNW1 292 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 PYHIN1Q6K0P9 492 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF813Q6ZN06 617 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 PRR18Q8N4B5 295 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 TAAR6Q96RI8 345 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 AUNIPQ9H7T9 357 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 BCO1Q9HAY6 547 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 FOXJ3Q9UPW0 622 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 DBX1A6NMT0 343 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 SYNGR3O43761 229 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 HLA-DQB1P01920 261 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 PSG4Q00888 419 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 ASAH1Q13510 395 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 GLYATL3Q5SZD4 288 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 SLC16A14Q7RTX9 510 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 C9orf62Q8N4C0 152 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 OR13C9Q8NGT0 318 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 PGAM5Q96HS1 289 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 SPACA5Q96QH8 159 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-201ENST00000399126 MMP28Q9H239 520 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 MOB1AQ9H8S9 216 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
COL25A1-201ENST00000399126 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 M0R135 149 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 CST2P09228 141 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 CPN1P15169 458 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 OTX1P32242 354 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-201ENST00000399126 BMI1P35226 326 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 ARF1P84077 181 aaKnown RBP13.22□□□□□ -0.29
COL25A1-201ENST00000399126 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 BRICD5Q6PL45 260 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 C19orf18Q8NEA5 215 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 OR52N4Q8NGI2 321 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 THRSPQ92748 146 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF799Q96GE5 643 aa13.22□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF503-AS2A6NEH8 195 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 SLC17A2O00624 439 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 CALCBP10092 127 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 CTSSP25774 331 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF57Q68EA5 555 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-201ENST00000399126 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 SLC22A4Q9H015 551 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 ESRP2Q9H6T0 727 aaKnown RBP13.21□□□□□ -0.29
COL25A1-201ENST00000399126 PRSS50Q9UI38 385 aa13.21□□□□□ -0.29
COL25A1-201ENST00000399126 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 SLC22A20A6NK97 555 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 UBL3O95164 117 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 HTR3BO95264 441 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 CRYGSP22914 178 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 CDK2P24941 298 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 RAB11BQ15907 218 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 C2orf76Q3KRA6 126 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 PRR14LQ5THK1 2151 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 OR10K2Q6IF99 312 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 OR4D6Q8NGJ1 314 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 OR2AE1Q8NHA4 323 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 FAM3DQ96BQ1 224 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 LINC00052Q96N35 136 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 RDH8Q9NYR8 311 aa13.21□□□□□ -0.3
COL25A1-201ENST00000399126 KDM4BO94953 1096 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 IFNA7P01567 189 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 IGHG3P01860 377 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 SDHBP21912 280 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 G0S2P27469 103 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 MAB21L1Q13394 359 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 RAB35Q15286 201 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 LYPD6Q86Y78 171 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 MCEMP1Q8IX19 187 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 GCNT2Q8N0V5 402 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 OR5M9Q8NGP3 310 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 RFT1Q96AA3 541 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 APH1AQ96BI3 265 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 SLC17A5Q9NRA2 495 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 WRBO00258 174 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 KIR2DL3P43628 341 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 HTR5AP47898 357 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 ART1P52961 327 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 TUSC1Q2TAM9 212 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms