RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CAPZBP47756 277 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PKIAP61925 76 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ZP4Q12836 540 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR4C5Q8NGB2 326 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FAM3CQ92520 227 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SEH1LQ96EE3 360 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 WWTR1Q9GZV5 400 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SLC2A4RGQ9NR83 387 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RAB22AQ9UL26 194 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 B3GALT5Q9Y2C3 310 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FRG2CA6NGY1 282 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 AQP7O14520 342 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 IGKV3-11P04433 115 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 GLI4P10075 376 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FCGR2AP12318 317 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 HOXB2P14652 356 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ARL3P36405 182 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SLC35A1P78382 337 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ADPRHL1Q8NDY3 354 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR51I2Q9H344 312 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SLC39A9Q9NUM3 307 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SUSD2Q9UGT4 822 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 COL4A3Q01955 1670 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PLXNB3Q9ULL4 1909 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ELOA3CA0A087WX78 387 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF816-ZNF321PA0A0X1KG74 233 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 XKRY2A2RUG3 117 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 TCF21O43680 179 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 MSX1P28360 303 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 BLVRBP30043 206 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 NANOS3P60323 173 aaKnown RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 BTG2P78543 158 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PPP1R1AQ13522 171 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 VAX1Q5SQQ9 334 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF660Q6AZW8 331 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF321PQ8N8H1 164 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RPUSD4Q96CM3 377 aaKnown RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 C2orf50Q96LR7 162 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SMDT1Q9H4I9 107 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 TMEM100Q9NV29 134 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CA14Q9ULX7 337 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CACNA1HO95180 2353 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 A0A1W2PQF6 199 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 HLA-HP01893 362 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SUMO1P63165 101 aaKnown RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 BAXQ07812 192 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FAM219AQ8IW50 185 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 UEVLDQ8IX04 471 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 MAP3K3Q99759 626 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 REG4Q9BYZ8 158 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SERGEFQ9UGK8 458 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 V9GYS6 101 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 FGF16O43320 207 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HCRTR1O43613 425 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GPR137BO60478 399 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 NTN1O95631 604 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 IGHMP01871 453 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ACAA1P09110 424 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ECI1P42126 302 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TAS2R30P59541 319 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TMPPEQ6ZT21 453 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 C16orf52Q8NHV5 167 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 KCNG3Q8TAE7 436 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RNF138Q8WVD3 245 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RNF133Q8WVZ7 376 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ASB5Q8WWX0 329 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 S1PR5Q9H228 398 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 KCNK15Q9H427 330 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 CERS4Q9HA82 394 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF160Q9HCG1 818 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GSN-AS1Q9NRJ2 163 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 KLHL13Q9P2N7 655 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 PCDHGA1Q9Y5H4 931 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 FLVCR1Q9Y5Y0 555 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 CENPVL1A0A0U1RR11 272 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 LOC102725191A0A1B0GVB3 256 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TLCD2A6NGC4 264 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF727A8MUV8 499 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 WNT11O96014 354 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RPLP1P05386 114 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HEXAP06865 529 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HOXB1P14653 301 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 KRTDAPP60985 99 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HTRA3P83110 453 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 DHRS2Q13268 280 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GPR137CQ8N3F9 429 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OR52N5Q8NH56 324 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF2Q9BSG1 426 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TNFSF18Q9UNG2 199 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 SRPK3Q9UPE1 567 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 B9D1Q9UPM9 204 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ADAM11O75078 769 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 PDGFBP01127 241 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OPN1LWP04000 364 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GAPDHP04406 335 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 SFTPDP35247 375 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms