RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.84■□□□□ 0.453e-9■■■□□ 17.3
TSPAN4-206ENST00000397408 LOC107986453A0A1B0GWG9 222 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 EFCAB10A6NFE3 127 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 SYT7O43581 403 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 IRF2P14316 349 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 MYL12AP19105 171 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 HSPA13P48723 471 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 ETV1P50549 477 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 BTG1P62324 171 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 ZMYND11Q15326 602 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 ZBTB37Q5TC79 503 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 C1orf87Q8N0U7 546 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 TMEM80Q96HE8 168 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 C1orf123Q9NWV4 160 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 FRRS1LQ9P0K9 344 aa17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 EXOSC1Q9Y3B2 195 aaKnown RBP17.83■□□□□ 0.45
TSPAN4-206ENST00000397408 NSD1Q96L73 2696 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-206ENST00000397408 SONP18583 2426 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 PIPP12273 146 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF154Q13106 437 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 CEP78Q5JTW2 689 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 CYB5R2Q6BCY4 276 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 Q6ZSR3 168 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 AHSA2Q719I0 299 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 KRT74Q7RTS7 529 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 RDH10Q8IZV5 341 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 OR1M1Q8NGA1 313 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 OR5P3Q8WZ94 311 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 MSI2Q96DH6 328 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 HIST1H2AAQ96QV6 131 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 ANKRD60Q9BZ19 345 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 FGF23Q9GZV9 251 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 PLEKHA1Q9HB21 404 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 PLCXD1Q9NUJ7 323 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 UBAP1Q9NZ09 502 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 CNOT2Q9NZN8 540 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 PSORS1C1Q9UIG5 152 aa17.82■□□□□ 0.44
TSPAN4-206ENST00000397408 hCG_1807616A0A1W2PRN6 198 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 DHRS7CA6NNS2 312 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF205O95201 554 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 THBS2P35442 1172 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 VHLP40337 213 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CCR9P51686 369 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 GBX2P52951 348 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 LMO4P61968 165 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CSNK2BP67870 215 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 ST3GAL4Q11206 333 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 MRPL28Q13084 256 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 ALKBH1Q13686 389 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 FAM201AQ5SY85 155 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 OR2G6Q5TZ20 316 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 PLCXD3Q63HM9 321 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF826PQ6ZT77 177 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 KCTD8Q6ZWB6 473 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 EGFL6Q8IUX8 553 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 KLHL36Q8N4N3 616 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 RNF170Q96K19 258 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF665Q9H7R5 613 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 A6NIN4 97 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 E9PI62 339 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 NRASP01111 189 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 MYF6P23409 242 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 HOXA4Q00056 320 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 MED21Q13503 144 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 DMRTC1Q5HYR2 192 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CLVS2Q5SYC1 327 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 TMEM244Q5VVB8 128 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 TMPRSS11AQ6ZMR5 421 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 MOB3CQ70IA8 216 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CCDC54Q8NEL0 328 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 RAB39BQ96DA2 213 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CHCHD3Q9NX63 227 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 RNF7Q9UBF6 113 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CLEC2DQ9UHP7 191 aa17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 CAB39Q9Y376 341 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-206ENST00000397408 MALRD1Q5VYJ5 2156 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 TMEM210A6NLX4 147 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 OR4C45A6NMZ5 311 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 FAM157AC9JC47 383 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 SLC1A7O00341 560 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 LMX1BO60663 402 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 IGHV2-5P01817 119 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 MDH2P40926 338 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 GPM6AP51674 278 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 CDH15P55291 814 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 TMEM155Q4W5P6 130 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 C6orf141Q5SZD1 244 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 TMEM42Q69YG0 159 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 LRRC28Q86X40 367 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 STX19Q8N4C7 294 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 SPICQ8N5J4 248 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 BOLLQ8N9W6 283 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 YAE1D1Q9NRH1 226 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 GPR173Q9NS66 373 aa17.8■□□□□ 0.44
TSPAN4-206ENST00000397408 PPIAL4EA0A075B759 164 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 PPIAL4DF5H284 164 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 ISG15P05161 165 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 PPIAL4FP0DN26 164 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF12P17014 697 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 CEACAM21Q3KPI0 293 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms