RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 S100A8P05109 93 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
CCNF-202ENST00000397066 TMEM33P57088 247 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 MST1LQ2TV78 715 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 MIDNQ504T8 468 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 C15orf54Q8N8G6 183 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 METTL7AQ9H8H3 244 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCNF-202ENST00000397066 SRPK3Q9UPE1 567 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
CCNF-202ENST00000397066 IGHMP01871 453 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 P2RY4P51582 365 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 ZNF561Q8N587 486 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 SLCO1B1Q9Y6L6 691 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 A0A0A6YYD4 124 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 MFNGO00587 321 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 TGIF1Q15583 401 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 PIGTQ969N2 578 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 RTBDNQ9BSG5 229 aaPredicted RBP13.02□□□□□ -0.32
CCNF-202ENST00000397066 ZNF160Q9HCG1 818 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.32
CCNF-202ENST00000397066 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.33
CCNF-202ENST00000397066 ZNF43P17038 809 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 DCDP81605 110 aaKnown RBP13.02□□□□□ -0.33
CCNF-202ENST00000397066 QRFPP83859 136 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 AWAT1Q58HT5 328 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 HSD17B11Q8NBQ5 300 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 ST8SIA1Q92185 356 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 VN1R1Q9GZP7 353 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 LUZP4Q9P127 313 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 ZMAT5Q9UDW3 170 aaKnown RBP13.02□□□□□ -0.33
CCNF-202ENST00000397066 XIRP2A4UGR9 3374 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 A6NLC8 198 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
CCNF-202ENST00000397066 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 NQO2P16083 231 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 TMEM50BP56557 158 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 HMGN3Q15651 99 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 THEM4Q5T1C6 240 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 OPN5Q6U736 354 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 MISPQ8IVT2 679 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 TCTEX1D2Q8WW35 142 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 PRRX2Q99811 253 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 AMDHD2Q9Y303 409 aa13.02□□□□□ -0.33
CCNF-202ENST00000397066 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 FIGNL2A6NMB9 653 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 HKR1P10072 659 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 SULT1A2P50226 295 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 FAM69BQ5VUD6 431 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 ZNF565Q8N9K5 539 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 POC1AQ8NBT0 407 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 LIN37Q96GY3 246 aaPredicted RBP13.01□□□□□ -0.33
CCNF-202ENST00000397066 TWSG1Q9GZX9 223 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 FBXO7Q9Y3I1 522 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 B3GALT1Q9Y5Z6 326 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 TLX3O43711 291 aaPredicted RBP13.01□□□□□ -0.33
CCNF-202ENST00000397066 DIRAS3O95661 229 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 OR13C7P0DN81 318 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 GLP1RP43220 463 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 RNF4P78317 190 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 HSD11B2P80365 405 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 C10orf91Q5T1B1 145 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 DOK3Q7L591 496 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 MOB1AQ9H8S9 216 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 A0A1W2PR64 198 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 COLCA2A8K830 154 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 XRCC2O43543 280 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 OR1D5P58170 312 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 SUPT4H1P63272 117 aaKnown RBP13.01□□□□□ -0.33
CCNF-202ENST00000397066 SP6Q3SY56 376 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 IGSF11Q5DX21 431 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
CCNF-202ENST00000397066 ANKUB1A6NFN9 424 aa13□□□□□ -0.33
CCNF-202ENST00000397066 UMAD1C9J7I0 102 aa13□□□□□ -0.33
CCNF-202ENST00000397066 FTCDNL1E5RQL4 147 aa13□□□□□ -0.33
CCNF-202ENST00000397066 HABP2Q14520 560 aaPredicted RBP13□□□□□ -0.33
CCNF-202ENST00000397066 KISS1Q15726 138 aa13□□□□□ -0.33
CCNF-202ENST00000397066 GUK1Q16774 197 aa13□□□□□ -0.33
CCNF-202ENST00000397066 FAM24BQ8N5W8 94 aa13□□□□□ -0.33
CCNF-202ENST00000397066 OR6S1Q8NH40 331 aa13□□□□□ -0.33
CCNF-202ENST00000397066 ZNF285Q96NJ3 590 aa13□□□□□ -0.33
CCNF-202ENST00000397066 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
CCNF-202ENST00000397066 PARP11Q9NR21 331 aa13□□□□□ -0.33
CCNF-202ENST00000397066 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
CCNF-202ENST00000397066 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
CCNF-202ENST00000397066 C7orf77A4D0Y5 90 aa13□□□□□ -0.33
CCNF-202ENST00000397066 LINC00587B1AMM8 73 aa13□□□□□ -0.33
CCNF-202ENST00000397066 LINC01387J3KSC0 135 aa13□□□□□ -0.33
CCNF-202ENST00000397066 MT-ND4LP03901 98 aa13□□□□□ -0.33
CCNF-202ENST00000397066 OR1L3Q8NH93 324 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms