RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NXPH3O95157 252 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 ZNF44P15621 663 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 ANOS1P23352 680 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 ADH6P28332 368 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 FOXC1Q12948 553 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 CDK10Q15131 360 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 STEAP2Q8NFT2 490 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 CPNE4Q96A23 557 aaPredicted RBP13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 SLCO5A1Q9H2Y9 848 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 TIMM10BQ9Y5J6 103 aa13.96□□□□□ -0.17
SMARCD1-202ENST00000394963 RGS11O94810 467 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 NRASP01111 189 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 GRPP07492 148 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 ROM1Q03395 351 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 MEX3BQ6ZN04 569 aaKnown RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 SKA3Q8IX90 412 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 C12orf45Q8N5I9 185 aaPredicted RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 NKAIN3Q8N8D7 197 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 DUSP18Q8NEJ0 188 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 RDH5Q92781 318 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 FOXRED1Q96CU9 486 aaPredicted RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 ZC3HAV1LQ96H79 300 aaKnown RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 CMSS1Q9BQ75 279 aaKnown RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 FAAP24Q9BTP7 215 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 FAM206AQ9NX38 181 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 EMC3Q9P0I2 261 aa13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.18
SMARCD1-202ENST00000394963 H7C417 338 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 TPD52L2O43399 206 aaKnown RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 GZMKP49863 264 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 KLF9Q13886 244 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 PHLDA2Q53GA4 152 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 ZNF684Q5T5D7 378 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 MRI1Q9BV20 369 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 MTFP1Q9UDX5 166 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 KLF13Q9Y2Y9 288 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 APOC1P02654 83 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 HAAOP46952 286 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 ZP4Q12836 540 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 LTC4SQ16873 150 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 FBXL14Q8N1E6 418 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 ZNF436Q9C0F3 470 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 RANBP3Q9H6Z4 567 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 CA10Q9NS85 328 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 USF3Q68DE3 2245 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 A0A1B0GV50 99 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 GPM6AP51674 278 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 CLN3Q13286 438 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 SLC25A47Q6Q0C1 308 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 MUC20Q8N307 709 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 SEH1LQ96EE3 360 aa13.95□□□□□ -0.18
SMARCD1-202ENST00000394963 TRAV39A0A0B4J263 110 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 SLC22A20A6NK97 555 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 F5H5P2 479 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 MRPS10P82664 201 aaKnown RBP13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 PSG4Q00888 419 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 OR2T2Q6IF00 324 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 TMEM178AQ8NBL3 297 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 FDCSPQ8NFU4 85 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 OR56B2PQ8NGI1 322 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 FGFBP3Q8TAT2 258 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 PMS2P2O95744 297 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 FABP6P51161 128 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 GRK1Q15835 563 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 RAB12Q6IQ22 244 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 OR10R2Q8NGX6 335 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 KCNE4Q8WWG9 221 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 PLPPR2Q96GM1 343 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 ESRP2Q9H6T0 727 aaKnown RBP13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 PRSS50Q9UI38 385 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 LOC102723996A0A087X1L8 192 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 LOC102725191A0A1B0GVB3 256 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 NAP1L6A6NFF2 107 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 GAAP10253 952 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 CDH20Q9HBT6 801 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 SLC23A1Q9UHI7 598 aa13.94□□□□□ -0.18
SMARCD1-202ENST00000394963 LAMA5O15230 3695 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 PTGFRP43088 359 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 IKZF1Q13422 519 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 HAGHLQ6PII5 290 aaPredicted RBP13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 MRPL13Q9BYD1 178 aaKnown RBP13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 LRP4O75096 1905 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 E9PLN8 166 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 SP1P08047 785 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 PTBP1P26599 531 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 RBP2P50120 134 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 TEX30Q5JUR7 227 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 MFFQ9GZY8 342 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 RDH8Q9NYR8 311 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 ANKRD20A5PA0PJZ0 165 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 ZSCAN5BA6NJL1 495 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 SELEP16581 610 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 PCBD1P61457 104 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 DYRK1AQ13627 763 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 SP6Q3SY56 376 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 OR56B1Q8NGI3 324 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 ST8SIA4Q92187 359 aa13.93□□□□□ -0.18
SMARCD1-202ENST00000394963 SMIM3Q9BZL3 60 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms