RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CHCHD2Q9Y6H1 151 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 LOC102723996A0A087X1L8 192 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 NPIPB13A6NJU9 1138 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 NPIPB4C9JG80 1138 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 DNASE2O00115 360 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 ETV2O00321 342 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 OR2F2O95006 317 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 CRHP06850 196 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 SERPINA2P20848 420 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC6A9P48067 706 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 OR2F1Q13607 317 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 UBE2V2Q15819 145 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 CLEC18BQ6UXF7 455 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 ZDHHC22Q8N966 263 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 OR10C1Q96KK4 312 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM231Q9H6L2 316 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 CHMP1AQ9HD42 196 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 ASPMQ8IZT6 3477 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 MSTNO14793 375 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 ICAM2P13598 275 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 CNR1P21554 472 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 GPR85P60893 370 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 ARFRP1Q13795 201 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 SNTB1Q13884 538 aaKnown RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 FOXRED2Q8IWF2 684 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 OR14K1Q8NGZ2 314 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 THAP6Q8TBB0 222 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF160Q9HCG1 818 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 M0R296 226 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 GPR31O00270 319 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 DUS4LO95620 317 aaKnown RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 GP1BAP07359 652 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 CCL3P10147 92 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 FGL1Q08830 312 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 SLC25A53Q5H9E4 307 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 DRAM2Q6UX65 266 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 OR51T1Q8NGJ9 327 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 PAQR8Q8TEZ7 354 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 TMED6Q8WW62 240 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 IMMP1LQ96LU5 166 aa11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 ELL3Q9HB65 397 aaPredicted RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF107Q9UII5 783 aaPredicted RBP11.83□□□□□ -0.52
GTF2F1-201ENST00000394456 DOCK10Q96BY6 2186 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF726A6NNF4 738 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 MFNGO00587 321 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PATE4P0C8F1 98 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PSMB6P28072 239 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 MSX1P28360 303 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PLEKHN1Q494U1 663 aaPredicted RBP11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 AADACL3Q5VUY0 350 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PGAP1Q75T13 922 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 OR2Y1Q8NGV0 311 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 OR6X1Q8NH79 312 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PGAM5Q96HS1 289 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 OXGR1Q96P68 337 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 LDAHQ9H6V9 325 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 FANCFQ9NPI8 374 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 GPR132Q9UNW8 380 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 HPNP05981 417 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF345Q14585 488 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 KISS1Q15726 138 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 GALNTL5Q7Z4T8 443 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF700Q9H0M5 742 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
GTF2F1-201ENST00000394456 LNP1A1A4G5 178 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 ACTL6AO96019 429 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 HOXB5P09067 269 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 SP9P0CG40 484 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 HLA-GP17693 338 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 AMY2BP19961 511 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 MPZP25189 248 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 FOLR3P41439 243 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 ENDOGQ14249 297 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 HIST3H3Q16695 136 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 SNAI3Q3KNW1 292 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 LPCAT3Q6P1A2 487 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 C6orf201Q7Z4U5 140 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 EIF4E3Q8N5X7 224 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 INO80EQ8NBZ0 244 aaPredicted RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 SSC4DQ8WTU2 575 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 DYRK2Q92630 601 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 ACKR4Q9NPB9 350 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 IGLV3-32A0A0A0MS00 114 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 NSG1A0A0A6YYJ2 146 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 TP53I11O14683 189 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms