RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PIGTQ969N2 578 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 TRGV10A0A0A0MS01 117 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 IFITM10A6NMD0 228 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 DIRC3C9JPN6 131 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 FAM3BP58499 235 aaPredicted RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 DOK4Q8TEW6 326 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 TAS2R4Q9NYW5 299 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 A0A0U1RQF3 1178 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 ZBTB25P24278 435 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 SAXO2Q658L1 398 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 H1FNTQ75WM6 255 aaPredicted RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 NANOGP1Q8N7R0 232 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 TXNIPQ9H3M7 391 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 ZNF646O15015 1829 aaPredicted RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 J3KTA2 159 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 HOXC5Q00444 222 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 ARRDC1Q8N5I2 433 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 LRRC15Q8TF66 581 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 OR2A5Q96R48 311 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 ZNF385DQ9H6B1 395 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 DNASE2O00115 360 aaPredicted RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 DCAF12Q5T6F0 453 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 NXPE3Q969Y0 559 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 LRRC3BQ96PB8 259 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 CPEB1Q9BZB8 566 aaKnown RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 UBE2ZQ9H832 354 aaPredicted RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 CALHM2Q9HA72 323 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 TMEM88BA6NKF7 163 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 P01737 135 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 H7C2G1 150 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 DEFB110Q30KQ9 67 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 KAZALD1Q96I82 304 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 C1QTNF3Q9BXJ4 246 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 PRR14LQ5THK1 2151 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 OR5B21A6NL26 309 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 IFITM5A6NNB3 132 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 TEAD1P28347 426 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 TMEM167BQ9NRX6 74 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 LOC107986453A0A1B0GWG9 222 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 OR4C45A6NMZ5 311 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 APCSP02743 223 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 EVX1P49640 407 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 DCBLD2Q96PD2 775 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 SELENOFO60613 162 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 TBXA2RP21731 343 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 PMP22Q01453 160 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 MED12LQ86YW9 2145 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 BHLHE23Q8NDY6 225 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 BVESQ8NE79 360 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 H7C1C5 153 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 UTS2O95399 124 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 POU2F2P09086 479 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 FUT2Q10981 343 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 Q56UQ5 140 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 SYT14P1Q58G82 188 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 DNLZQ5SXM8 178 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 LAIR1Q6GTX8 287 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 CDCA4Q9BXL8 241 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 LANCL2Q9NS86 450 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 UQCR10Q9UDW1 63 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 SLC5A6Q9Y289 635 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 CYR61O00622 381 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
USP49-203ENST00000394253 KMT5CQ86Y97 462 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
USP49-203ENST00000394253 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 CDC14CA4D256 554 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 CBARPQ8N350 705 aaPredicted RBP12.18□□□□□ -0.46
USP49-203ENST00000394253 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 HES7Q9BYE0 225 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 SPINK4O60575 86 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 ZNF253O75346 499 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 FAM53CQ9NYF3 392 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 ICAM5Q9UMF0 924 aa12.18□□□□□ -0.46
USP49-203ENST00000394253 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 FZD2Q14332 565 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 Q8IYB0 196 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 ZNF383Q8NA42 475 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 CDC42EP3Q9UKI2 254 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 DOCK4Q8N1I0 1966 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 PTRH1Q86Y79 214 aaKnown RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 ZDHHC22Q8N966 263 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 OR52N4Q8NGI2 321 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 NUDCD2Q8WVJ2 157 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms