RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LYRM1O43325 122 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 GSTZ1O43708 216 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 PFDN1O60925 122 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 CRTAPO75718 401 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 ALX3O95076 343 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 FAM157BP0CG42 384 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 VSIG8P0DPA2 414 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 CBR1P16152 277 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 RAB6AP20340 208 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 BMP5P22003 454 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 OPRM1P35372 400 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 PTGFRP43088 359 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 KLRB1Q12918 225 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SLC22A6Q4U2R8 563 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SPATA46Q5T0L3 261 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 BIVMQ86UB2 503 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 MYPOPQ86VE0 399 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 TOMM5Q8N4H5 51 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ACBD4Q8NC06 268 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 CHST4Q8NCG5 386 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 OR52I2Q8NH67 350 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SMIM4Q8WVI0 70 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 TRIM63Q969Q1 353 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 BORCS8Q96FH0 119 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ZNF75AQ96N20 296 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 NEDD4LQ96PU5 975 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 PAPOLGQ9BWT3 736 aaKnown RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 DSPP15924 2871 aaKnown RBP7.46□□□□□ -1.22
TDP1-203ENST00000393454 EEF1E1-BLOC1S5C9J1V9 151 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 MPIG6BO95866 241 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 PLATP00750 562 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 TMEM225BP0DP42 221 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 MNDAP41218 407 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 RFX2P48378 723 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 VEGFCP49767 419 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 MRPS10P82664 201 aaKnown RBP7.46□□□□□ -1.22
TDP1-203ENST00000393454 UNC119Q13432 240 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 HACD4Q5VWC8 232 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 ZNF474Q6S9Z5 364 aaPredicted RBP7.46□□□□□ -1.22
TDP1-203ENST00000393454 RFPL4BQ6ZWI9 263 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 C17orf78Q8N4C9 275 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 BHLHE23Q8NDY6 225 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 KCNG3Q8TAE7 436 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 SSC4DQ8WTU2 575 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 PTX4Q96A99 478 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 SPSB1Q96BD6 273 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 CPNE2Q96FN4 548 aaPredicted RBP7.46□□□□□ -1.22
TDP1-203ENST00000393454 CCDC120Q96HB5 630 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 BANF2Q9H503 90 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 TBCCD1Q9NVR7 557 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 MRPL15Q9P015 296 aaKnown RBP7.46□□□□□ -1.22
TDP1-203ENST00000393454 CACNG2Q9Y698 323 aa7.46□□□□□ -1.22
TDP1-203ENST00000393454 A0A0G2JNJ9 132 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 FAM240BA0A1B0GVZ2 78 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 MEIOCA2RUB1 952 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CENPXA8MT69 81 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ORC5O43913 435 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 UBBP0CG47 229 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 PRSS3P35030 304 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 GDNFP39905 211 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 RBP2P50120 134 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 FUT6P51993 359 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ATP1B3P54709 279 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 PPP1CBP62140 327 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 QRFPP83859 136 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 MOGAT2Q3SYC2 334 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ZBTB37Q5TC79 503 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 LHFPL2Q6ZUX7 228 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 NCCRP1Q6ZVX7 275 aaPredicted RBP7.45□□□□□ -1.22
TDP1-203ENST00000393454 OR2W3Q7Z3T1 314 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 C1QL2Q7Z5L3 287 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 FTMTQ8N4E7 242 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TMEM104Q8NE00 496 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 OR10K1Q8NGX5 313 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TMEM59Q9BXS4 323 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 MMP28Q9H239 520 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 OPA3Q9H6K4 179 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 RBFOX1Q9NWB1 397 aaKnown RBP7.45□□□□□ -1.22
TDP1-203ENST00000393454 Q9UFV3 132 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 GPR160Q9UJ42 338 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ZNF835Q9Y2P0 537 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 A0A1W2PP11 408 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 MEIS3P1A6NDR6 274 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 OR5H1A6NKK0 313 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ANKRD30BLA7E2S9 258 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CD300LBA8K4G0 201 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TMEM14DPA8MWL7 114 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 SPRY1O43609 319 aaPredicted RBP7.45□□□□□ -1.22
TDP1-203ENST00000393454 CDC14BO60729 498 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TPPPO94811 219 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 SERPINA2P20848 420 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 PRDX4Q13162 271 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 GPR176Q14439 515 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TMEM42Q69YG0 159 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 OR2T2Q6IF00 324 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 RAB12Q6IQ22 244 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CELF2-AS1Q8N7Q2 184 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CSNK2A3Q8NEV1 391 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms