RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MTCH2Q9Y6C9 303 aa16.58■□□□□ 0.24
CBX1-202ENST00000393408 TOX3O15405 576 aaPredicted RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 PTGFRP43088 359 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 ALDH3B1P43353 468 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 SNU13P55769 128 aaKnown RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 TAS2R46P59540 309 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 CSNK2A1P68400 391 aaPredicted RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 ACY1Q03154 408 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 ECH1Q13011 328 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 IL15RAQ13261 267 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 ZNF585AQ6P3V2 769 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 PNLDC1Q8NA58 520 aaKnown RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 CSNK2A3Q8NEV1 391 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 OR5D18Q8NGL1 313 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 LIN37Q96GY3 246 aaPredicted RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 C2orf50Q96LR7 162 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 PRELID3BQ9Y3B1 194 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 NCOA6Q14686 2063 aaPredicted RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 CABIN1Q9Y6J0 2220 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 NAT2P11245 290 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 GLRA1P23415 457 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 TMEM176BQ3YBM2 270 aaPredicted RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 NSUN5P2Q63ZY6 315 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 PGAM5Q96HS1 289 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 METTL8Q9H825 291 aaKnown RBP16.57■□□□□ 0.24
CBX1-202ENST00000393408 EHFQ9NZC4 300 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 GHRLQ9UBU3 117 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 NDRG3Q9UGV2 375 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 MYO15AQ9UKN7 3530 aa16.57■□□□□ 0.24
CBX1-202ENST00000393408 LOC102725191A0A1B0GVB3 256 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 SCRG1O75711 98 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 DKK1O94907 266 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 HPNP05981 417 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 DCDP81605 110 aaKnown RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 RAB32Q13637 225 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 TMEM88Q6PEY1 159 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 WDSUB1Q8N9V3 476 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 OR51F2Q8NH61 342 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 SLC22A8Q8TCC7 542 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 SLC25A43Q8WUT9 341 aaPredicted RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 CNTNAP3BQ96NU0 1288 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 ADAT1Q9BUB4 502 aaKnown RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 PECRQ9BY49 303 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 DNAJB11Q9UBS4 358 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 HDGFL3Q9Y3E1 203 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 F8W036 122 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 CSTBP04080 98 aaKnown RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 AFF3P51826 1226 aaKnown RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 BLOC1S1P78537 153 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 FADS6Q8N9I5 356 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 MAFIPQ8WZ33 124 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 SLC5A7Q9GZV3 580 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 LPAR3Q9UBY5 353 aa16.56■□□□□ 0.24
CBX1-202ENST00000393408 ASCC3Q8N3C0 2202 aaKnown RBP16.56■□□□□ 0.24
CBX1-202ENST00000393408 BCAT2O15382 392 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 BLVRBP30043 206 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 CLDN17P56750 224 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 LSM6P62312 80 aaKnown RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 HFEQ30201 348 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 IL34Q6ZMJ4 242 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 ADAMTS17Q8TE56 1095 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 NPRL2Q8WTW4 380 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 EMG1Q92979 244 aaKnown RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 WNT2BQ93097 391 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 SPACA9Q96E40 222 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 RASL10BQ96S79 203 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 SPSB2Q99619 263 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 TLNRD1Q9H1K6 362 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 FIGNL2A6NMB9 653 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 ZNF705EA8MWA4 302 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 THBS4P35443 961 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 ZNF385CQ66K41 422 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 HAGHLQ6PII5 290 aaPredicted RBP16.55■□□□□ 0.24
CBX1-202ENST00000393408 FAM219AQ8IW50 185 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 DNASE2BQ8WZ79 361 aa16.55■□□□□ 0.24
CBX1-202ENST00000393408 MED12Q93074 2177 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 PMS2P1A4D2B8 440 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 STMND1H3BQB6 276 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 MBTPS2O43462 519 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 TLX3O43711 291 aaPredicted RBP16.54■□□□□ 0.24
CBX1-202ENST00000393408 PET100P0DJ07 73 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 ADH6P28332 368 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 EIF1P41567 113 aaKnown RBP16.54■□□□□ 0.24
CBX1-202ENST00000393408 SLC35A1P78382 337 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 PJVKQ0ZLH3 352 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 SHBQ15464 509 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
CBX1-202ENST00000393408 UBE2V2Q15819 145 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 TMEM200AQ86VY9 491 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 DTX1Q86Y01 620 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 CRB3Q9BUF7 120 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 TM2D1Q9BX74 207 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 ZNF160Q9HCG1 818 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 V9GYS6 101 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 EML6Q6ZMW3 1958 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 PRUNE2Q8WUY3 3088 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 H7C2Y5 167 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 SERPINA2P20848 420 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 MSR1P21757 451 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms