RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CSTL1Q9H114 145 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 ADAM29Q9UKF5 820 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 LAMTOR2Q9Y2Q5 125 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 NSG2Q9Y328 171 aa6.86□□□□□ -1.31
VTI1A-201ENST00000393077 A0A0G2JK05 382 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF860A6NHJ4 632 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 GLOD5A6NK44 160 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 CTAG2O75638 210 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 DPP4P27487 766 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 HRH1P35367 487 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 LIMS1P48059 325 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 COL10A1Q03692 680 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF74Q16587 644 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 GLYATL3Q5SZD4 288 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OR5AU1Q8NGC0 362 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OR2T10Q8NGZ9 312 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 RBMXL1Q96E39 390 aaKnown RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 UTP23Q9BRU9 249 aaKnown RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 IER3IP1Q9Y5U9 82 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 PRRT4C9JH25 899 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 C9JQL5 133 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 F8VVB4 439 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 F8VWA3 439 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ALOX12BO75342 701 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 GCM2O75603 506 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 KLKB1P03952 638 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 SEC11BP0C7V7 166 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 CSNK2A2P19784 350 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 HSD11B1P28845 292 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 GRK6P43250 576 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 RGRP47804 291 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 AADACL3Q5VUY0 350 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ST6GALNAC5Q9BVH7 336 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 Q9N2K0 584 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM14AQ9Y6G1 99 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 C1QTNF3-AMACRE9PGA6 284 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 HKR1P10072 659 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 CD70P32970 193 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 VIPR2P41587 438 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ELLP55199 621 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 RAB31Q13636 194 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 TESK1Q15569 626 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 C2orf27AQ580R0 203 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 TPTE2P1Q5T6R2 138 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF468Q5VIY5 522 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-201ENST00000393077 AGBL4Q5VU57 503 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 KIRREL2Q6UWL6 708 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 SLC35E3Q7Z769 313 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 GBGT1Q8N5D6 347 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ACOT4Q8N9L9 421 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OR4X1Q8NH49 305 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 OVCA2Q8WZ82 227 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 SCAMP4Q969E2 229 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ATP5SQ99766 215 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 RARRES2Q99969 163 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 HSPB9Q9BQS6 159 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 ZBP1Q9H171 429 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 CMC2Q9NRP2 79 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 MTCH2Q9Y6C9 303 aa6.85□□□□□ -1.31
VTI1A-201ENST00000393077 LOXHD1Q8IVV2 1947 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 NPIPA5A0A0B4J1W7 369 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 XRCC2O43543 280 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 DDAH2O95865 285 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 C8orf89P0DMQ9 161 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 NTF3P20783 257 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF10P21506 573 aaPredicted RBP6.84□□□□□ -1.31
VTI1A-201ENST00000393077 ACRV1P26436 265 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 CEACAM6P40199 344 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 WNT5AP41221 380 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 SEC13P55735 322 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 FAM3BP58499 235 aaPredicted RBP6.84□□□□□ -1.31
VTI1A-201ENST00000393077 PRPS1P60891 318 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 C22orf39Q6P5X5 142 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 Q6ZVL8 140 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 TCEAL8Q8IYN2 117 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 COX18Q8N8Q8 333 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 IRF7Q92985 503 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 ARHGDIGQ99819 225 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 IL17CQ9P0M4 197 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 A0A087WWC5 75 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 LRP5LA4QPB2 252 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 MSGN1A6NI15 193 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF207O43670 478 aaKnown RBP6.84□□□□□ -1.31
VTI1A-201ENST00000393077 RENP00797 406 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 CA3P07451 260 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 PRPH2P23942 346 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 HTD2P86397 168 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 MFGE8Q08431 387 aaPredicted RBP6.84□□□□□ -1.31
VTI1A-201ENST00000393077 SRSF5Q13243 272 aaKnown RBP6.84□□□□□ -1.31
VTI1A-201ENST00000393077 FZD2Q14332 565 aa6.84□□□□□ -1.31
VTI1A-201ENST00000393077 SMIM21Q3B7S5 101 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms