RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 TTTY12Q9BZ98 90 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■■■□ 23.2
SNX9-201ENST00000392185 WDR1O75083 606 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 NDUFB7P17568 137 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 GALP22466 123 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 CA6P23280 308 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 BTG1P62324 171 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 OR52B4Q8NGK2 314 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 POLDIP2Q9Y2S7 368 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 MEIKINA0A087WXM9 373 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 GLRA1P23415 457 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 PTAFRP25105 342 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 OR2A2Q6IF42 318 aa14.61□□□□□ -0.07
SNX9-201ENST00000392185 MRPS18AQ9NVS2 196 aaKnown RBP14.61□□□□□ -0.07
SNX9-201ENST00000392185 PMS2P2O95744 297 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 OR3A4PP47883 348 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 EGR4Q05215 589 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 DYRK1AQ13627 763 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 TFAP2EQ6VUC0 442 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 PPP1R32Q7Z5V6 425 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 EIF5A2Q9GZV4 153 aaKnown RBP14.6□□□□□ -0.07
SNX9-201ENST00000392185 NECAP2Q9NVZ3 263 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 A0A0A6YYJ9 748 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 HSD17B6O14756 317 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 OR5H8P0DN80 308 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 CAMLGP49069 296 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 GPR157Q5UAW9 335 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 OSR2Q8N2R0 312 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 SLC30A7Q8NEW0 376 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 SLAMF9Q96A28 289 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 ARHGAP5-AS1Q96IT6 56 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 ANGPTL4Q9BY76 406 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 MIXL1Q9H2W2 232 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 SPACA1Q9HBV2 294 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 ASF1BQ9NVP2 202 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 TMEM272A0A1B0GTI8 110 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 GLSO94925 669 aaPredicted RBP14.6□□□□□ -0.07
SNX9-201ENST00000392185 MMP15P51511 669 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 STX12Q86Y82 276 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 PLPPR2Q96GM1 343 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 WDFY2Q96P53 400 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 SLC23A1Q9UHI7 598 aa14.6□□□□□ -0.07
SNX9-201ENST00000392185 NFYAP23511 347 aaPredicted RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 PTGFRP43088 359 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 LRRTM1Q86UE6 522 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 SPAG16Q8N0X2 631 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 CISD2Q8N5K1 135 aaKnown RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 ZNF610Q8N9Z0 462 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 SUN5Q8TC36 379 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 KIRREL1Q96J84 757 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 ZNF230Q9UIE0 474 aaPredicted RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 A0A0B4J2A0 478 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 LOC101059948A0A1B0GTJ6 334 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 FUT6P51993 359 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 DDA1Q9BW61 102 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 ZFP57Q9NU63 452 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 SHPKQ9UHJ6 478 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 ATG12O94817 140 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 S100A6P06703 90 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 OPCMLQ14982 345 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 PLGLAQ15195 96 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 SF3B5Q9BWJ5 86 aaKnown RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 ZNF436Q9C0F3 470 aaPredicted RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 C1orf123Q9NWV4 160 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 FREM3P0C091 2139 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 SNRNP200O75643 2136 aaKnown RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 IFNA17P01571 189 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 FCGR2CP31995 323 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 ZNF468Q5VIY5 522 aaPredicted RBP14.59□□□□□ -0.07
SNX9-201ENST00000392185 CD276Q5ZPR3 534 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 PAQR8Q8TEZ7 354 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 ASB5Q8WWX0 329 aa14.59□□□□□ -0.07
SNX9-201ENST00000392185 KIR2DS1A0A191URI9 304 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 NPIPB9F8W1W9 429 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 SPRY3O43610 288 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 SNAPC5O75971 98 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 AQP8O94778 261 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 TGM1P22735 817 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 KIR2DS4P43632 304 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 KIR2DS1Q14954 304 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 ARSJQ5FYB0 599 aaPredicted RBP14.58□□□□□ -0.08
SNX9-201ENST00000392185 OR2B11Q5JQS5 317 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 RNLSQ5VYX0 342 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 LSM2Q9Y333 95 aaKnown RBP14.58□□□□□ -0.08
SNX9-201ENST00000392185 PYCARD-AS1I3L0S3 204 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 CTAG2O75638 210 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 LSM6P62312 80 aaKnown RBP14.58□□□□□ -0.08
SNX9-201ENST00000392185 HIKESHIQ53FT3 197 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 OR4D6Q8NGJ1 314 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 RNF133Q8WVZ7 376 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 SPSB1Q96BD6 273 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 CEBPZOSA8MTT3 80 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 ATF4P18848 351 aaPredicted RBP14.58□□□□□ -0.08
SNX9-201ENST00000392185 C6orf201Q7Z4U5 140 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 FBLIM1Q8WUP2 373 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 FBXO17Q96EF6 278 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 SLA2Q9H6Q3 261 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 GFOD1Q9NXC2 390 aa14.58□□□□□ -0.08
SNX9-201ENST00000392185 MS4A18H0YCH9 400 aa14.57□□□□□ -0.08
SNX9-201ENST00000392185 GK2Q14410 553 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms