RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FAAP24Q9BTP7 215 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 A0A1W2PRU2 124 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 LINC00614P0C842 121 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 GLI4P10075 376 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 RABIFP47224 123 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 VAMP2P63027 116 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 INSM1Q01101 510 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 OR5I1Q13606 314 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 CLEC12BQ2HXU8 276 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 METTL27Q8N6F8 245 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 OR52N4Q8NGI2 321 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 GPR173Q9NS66 373 aa16.86■□□□□ 0.29
SMARCD1-201ENST00000381513 VSIG8P0DPA2 414 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 POLR2HP52434 150 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 HLA-DRB3P79483 266 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 IQCJQ1A5X6 159 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ADIPOR2Q86V24 386 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 OR4X1Q8NH49 305 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 FGGYQ96C11 551 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 V9GYS6 101 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 CLDN34H7C241 214 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 C1QL3Q5VWW1 255 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 NEK7Q8TDX7 302 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 LMLNQ96KR4 655 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 TMEM106CQ9BVX2 250 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 BANF2Q9H503 90 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 SPHK2Q9NRA0 654 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 AK3Q9UIJ7 227 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 B3GALT5Q9Y2C3 310 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 MPDZO75970 2070 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ZNF705FA8MVS1 300 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 P2RY10O00398 339 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 HSPA12AO43301 675 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ZNF705DP0CH99 300 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ZNF705BP0CI00 300 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 MORN1Q5T089 497 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 KCTD18Q6PI47 426 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 CACUL1Q86Y37 369 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 OR13G1Q8NGZ3 307 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 HIST1H2AAQ96QV6 131 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 DIRC2Q96SL1 478 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 ELOVL1Q9BW60 279 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 OR52A1Q9UKL2 312 aa16.85■□□□□ 0.29
SMARCD1-201ENST00000381513 XIRP2A4UGR9 3374 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 E5RGE8 158 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 SIAH2O43255 324 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 CT62P0C5K7 136 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 IDH3GP51553 393 aaPredicted RBP16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 RAB11AP62491 216 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 RPL23AP62750 156 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 CDK3Q00526 305 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 RPL18Q07020 188 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 METRNLQ641Q3 311 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 SNIP1Q8TAD8 396 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 GINS3Q9BRX5 216 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 TMEM74BQ9NUR3 256 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 NSG2Q9Y328 171 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 MMP9P14780 707 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 COL10A1Q03692 680 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 TMEM123Q8N131 208 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 NECAP1Q8NC96 275 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 RNASEH2CQ8TDP1 164 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 TSPAN32Q96QS1 320 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 CCL26Q9Y258 94 aa16.84■□□□□ 0.29
SMARCD1-201ENST00000381513 CNOT4O95628 575 aaKnown RBP16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 IGFBP3P17936 291 aaPredicted RBP16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 RUNX2Q13950 521 aa16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 ZNF774Q6NX45 483 aa16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 LINC00114Q6XXX2 140 aa16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 ZNF66Q6ZN08 573 aa16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 OR52R1Q8NGF1 315 aa16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 MRPS18CQ9Y3D5 142 aaKnown RBP16.83■□□□□ 0.29
SMARCD1-201ENST00000381513 SOCS1O15524 211 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 FGF17O60258 216 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 SLC16A7O60669 478 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 CA11O75493 328 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 TK1P04183 234 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 OMGP23515 440 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 MSX1P28360 303 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 FZD2Q14332 565 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 SAPCD1Q5SSQ6 148 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 CENPMQ9NSP4 180 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 EML5Q05BV3 1969 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 FIGNL2A6NMB9 653 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 B3GALT2O43825 422 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 PTGER4P35408 488 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 SUCLG1P53597 346 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 MLF2Q15773 248 aaPredicted RBP16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 SP6Q3SY56 376 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 C1orf100Q5SVJ3 147 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 ZNF248Q8NDW4 579 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 OR52E1Q8NGJ3 308 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 REEP6Q96HR9 211 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 IL21Q9HBE4 155 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 LRP12Q9Y561 859 aa16.83■□□□□ 0.28
SMARCD1-201ENST00000381513 USP34Q70CQ2 3546 aa16.82■□□□□ 0.28
SMARCD1-201ENST00000381513 PPM1FP49593 454 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-201ENST00000381513 TMEM176BQ3YBM2 270 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms