RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MARS2Q96GW9 593 aaKnown RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 TCTN2Q96GX1 697 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 NMES1Q9C002 83 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
SDC1-202ENST00000381150 DOK5Q9P104 306 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 MEMO1Q9Y316 297 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 PHOX2AO14813 284 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 ZNF20P17024 532 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 G0S2P27469 103 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 TAGLN2P37802 199 aaKnown RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 CAPZBP47756 277 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 EGR4Q05215 589 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 UNC119Q13432 240 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 RPUSD3Q6P087 351 aaKnown RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 SMIM8Q96KF7 97 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 RARRES2Q99969 163 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 NUDT22Q9BRQ3 303 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 DMRT1Q9Y5R6 373 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FRYLO94915 3013 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 A0A1W2PR77 199 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 MEGF11A6BM72 1044 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 ZNF93P35789 620 aaPredicted RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 CASP6P55212 293 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FBXW4P57775 412 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 ERGIC1Q969X5 290 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 LURAP1Q96LR2 239 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 C2orf50Q96LR7 162 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 EMC6Q9BV81 110 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 SMOC1Q9H4F8 434 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 UCK1Q9HA47 277 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FAM212BQ9NTI7 297 aaPredicted RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 ZNF726A6NNF4 738 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 CYB5BO43169 146 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 IL2RAP01589 272 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 CD5P06127 495 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 SCAND1P57086 179 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 TAS2R31P59538 309 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FXYD4P59646 89 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 OR1J1Q8NGS3 322 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 FNDC9Q8TBE3 224 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 ZDHHC12Q96GR4 267 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
SDC1-202ENST00000381150 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
SDC1-202ENST00000381150 EML5Q05BV3 1969 aa12.27□□□□□ -0.44
SDC1-202ENST00000381150 A0A087X0M5 115 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 A0A1B0GX30 115 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 WISP1O95388 367 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 SFT2D2O95562 160 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 PNMTP11086 282 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 KLK2P20151 261 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 HGFACQ04756 655 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 NELFAQ9H3P2 528 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 TREM2Q9NZC2 230 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 VSX1Q9NZR4 365 aaPredicted RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 BLACEA4D250 179 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 H0YIG0 161 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 RAMP1O60894 148 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 SLC34A2O95436 690 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 HLA-DOBP13765 273 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 SULT1A2P50226 295 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 RPS4XP62701 263 aaKnown RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 GLO1Q04760 184 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 CHRFAM7AQ494W8 412 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 RNASE11Q8TAA1 199 aaKnown RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 RPS4Y2Q8TD47 263 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 MR1Q95460 341 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 RNF122Q9H9V4 155 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 C14orf166Q9Y224 244 aaKnown RBP12.27□□□□□ -0.45
SDC1-202ENST00000381150 TIMM10BQ9Y5J6 103 aa12.27□□□□□ -0.45
SDC1-202ENST00000381150 IGHV5-51A0A0C4DH38 117 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 PRSS37A4D1T9 235 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ZNF264O43296 627 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 TMEM127O75204 238 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 CST4P01036 141 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 HKR1P10072 659 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 BCKDHBP21953 392 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
SDC1-202ENST00000381150 UBE2KP61086 200 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ZNF124Q15973 351 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms