RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 NAT8BQ9UHF3 227 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 PLPP1O14494 284 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 PMS2P2O95744 297 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 ECI1P42126 302 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 CEBPEQ15744 281 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 AGBL4Q5VU57 503 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 OR52N4Q8NGI2 321 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 RBPMSQ93062 196 aaKnown RBP11.21□□□□□ -0.62
CHD3-203ENST00000380358 OR2J1Q9GZK6 312 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 PCED1AQ9H1Q7 454 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 FGF17O60258 216 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 FAM87AP0C7U9 286 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 ADIPOQQ15848 244 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 SPINK14Q6IE38 97 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 TBC1D26Q86UD7 250 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 OSR2Q8N2R0 312 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 RPL12P30050 165 aaKnown RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 RPS4XP62701 263 aaKnown RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 DHODHQ02127 395 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 GSG1Q2KHT4 349 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 PAQR6Q6TCH4 344 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 VAMP8Q9BV40 100 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 HDAC8Q9BY41 377 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 CALCRP30988 508 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 WNT5AP41221 380 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 B2MP61769 119 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD3-203ENST00000380358 GDPGP1Q6ZNW5 385 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 C16orf47Q6ZP98 133 aaPredicted RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 LMO3Q8TAP4 145 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 MS4A7Q9GZW8 240 aaPredicted RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 UBQLN3Q9H347 655 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 TAPBPO15533 448 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 FBP1P09467 338 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 HIST1H3AP68431 136 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 GUCA2AQ02747 115 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 ABHD17CQ6PCB6 329 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 SLCO4C1Q6ZQN7 724 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 SIRT3Q9NTG7 399 aaPredicted RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 GPRIN2O60269 458 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 DGCR2P98153 550 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 FOXF1Q12946 379 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD3-203ENST00000380358 C11orf91Q3C1V1 193 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 PPOXP50336 477 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 NRG4Q8WWG1 115 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
CHD3-203ENST00000380358 GDF2Q9UK05 429 aaPredicted RBP11.2□□□□□ -0.62
CHD3-203ENST00000380358 ACSM4P0C7M7 580 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 SOX8P57073 446 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 TOX3O15405 576 aaPredicted RBP11.19□□□□□ -0.62
CHD3-203ENST00000380358 TNFRSF1AP19438 455 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
CHD3-203ENST00000380358 SHBQ15464 509 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 PELI1Q96FA3 418 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 OXGR1Q96P68 337 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 ADAMTSL4Q6UY14 1074 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 OR4S1Q8NGB4 309 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 PIGMQ9H3S5 423 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 BET1LQ9NYM9 111 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 FBXL4Q9UKA2 621 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 IGHV3OR16-10A0A075B7F0 116 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 MMP11P24347 488 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 CALHM3Q86XJ0 350 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 NUP205Q92621 2012 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 PRRT4C9JH25 899 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 HOXC13P31276 330 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 C1orf220Q5T0J3 134 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 RTN4IP1Q8WWV3 396 aaPredicted RBP11.19□□□□□ -0.62
CHD3-203ENST00000380358 CHRDL1Q9BU40 450 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 ETV7Q9Y603 341 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 ZNF324O75467 553 aaPredicted RBP11.19□□□□□ -0.62
CHD3-203ENST00000380358 SCG5P05408 212 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 PFN3P60673 137 aa11.19□□□□□ -0.62
CHD3-203ENST00000380358 THAP10Q9P2Z0 257 aaPredicted RBP11.19□□□□□ -0.62
CHD3-203ENST00000380358 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 C16orf52Q8NHV5 167 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 HS3ST3A1Q9Y663 406 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ICE1Q9Y2F5 2266 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 MT-ATP6P00846 226 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 CD82P27701 267 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 PPP1CBP62140 327 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 CACNG7P62955 275 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms