RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CLEC1BQ9P126 229 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 TIMM10BQ9Y5J6 103 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 F8VVB4 439 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 F8VWA3 439 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 CD5P06127 495 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 FOLR1P15328 257 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SULT1A1P50225 295 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 EGR3Q06889 387 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 MFAP5Q13361 173 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 LCN10Q6JVE6 187 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 TMEM104Q8NE00 496 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ASB13Q8WXK3 278 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF726A6NNF4 738 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 MFNGO00587 321 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNHIT1O43257 154 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 HCKP08631 526 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 PSMB6P28072 239 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SERPINF1P36955 418 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ADGRE4PQ86SQ3 457 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 OR52N5Q8NH56 324 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 CD300LFQ8TDQ1 290 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 GPX7Q96SL4 187 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 NUDT19A8MXV4 375 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 G3V3Y1 287 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 IFNA17P01571 189 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 SFTPBP07988 381 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 FCGR3AP08637 254 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 KLK2P20151 261 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 IGFBP4P22692 258 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 EBPQ15125 230 aaKnown RBP11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 ELOCQ15369 112 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 LANCL2Q9NS86 450 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 WIPF3A6NGB9 483 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 FAM157AC9JC47 383 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 H0YIZ8 118 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF432O94892 652 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 DDAH2O95865 285 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 GIMD1P0DJR0 217 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF84P51523 738 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 KIAA0895LQ68EN5 471 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 C15orf40Q8WUR7 153 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 LRFN5Q96NI6 719 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC46A1Q96NT5 459 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 TAAR9Q96RI9 348 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC2A4RGQ9NR83 387 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 PARPBPQ9NWS1 579 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 KLRF1Q9NZS2 232 aa11.05□□□□□ -0.64
PRPF40B-202ENST00000380281 IGLV1-36A0A0B4J1U3 117 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 SOCS1O15524 211 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 BCKDHBP21953 392 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 EMP2P54851 167 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 FNDC7Q5VTL7 733 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ALKBH2Q6NS38 261 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 OR56B1Q8NGI3 324 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 OR1L3Q8NH93 324 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF721Q8TF20 911 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 TXNIPQ9H3M7 391 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 METTL8Q9H825 291 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 GDF2Q9UK05 429 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 DIDO1Q9BTC0 2240 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 NCOA6Q14686 2063 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 NBEAQ8NFP9 2946 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 CRHP06850 196 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 CSRP1P21291 193 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC6A9P48067 706 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 BLKP51451 505 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 RNF126Q9BV68 326 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF407Q9C0G0 2248 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 SHANK1Q9Y566 2161 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC33A1O00400 549 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 PLPP3O14495 311 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 FABP4P15090 132 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 FBLP22087 321 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 HSD11B1P28845 292 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ESPL1Q14674 2120 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 SGCBQ16585 318 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 PRAMEF20Q5VT98 475 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 RPL7L1Q6DKI1 246 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF574Q6ZN55 896 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 Q6ZRG5 221 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 ADIPOR1Q96A54 375 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 VN1R1Q9GZP7 353 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 CRLF2Q9HC73 371 aa11.04□□□□□ -0.64
PRPF40B-202ENST00000380281 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms