RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 EIF4E3Q8N5X7 224 aaKnown RBP11.29□□□□□ -0.6
VPS13A-204ENST00000376634 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
VPS13A-204ENST00000376634 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 ZNF576Q9H609 170 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 PDLIM7Q9NR12 457 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 IL5P05113 134 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 RPS19P39019 145 aaKnown RBP11.29□□□□□ -0.6
VPS13A-204ENST00000376634 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 STUMQ69YW2 141 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 LYG2Q86SG7 212 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 ANKRD53Q8N9V6 530 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 ADGRG7Q96K78 797 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
VPS13A-204ENST00000376634 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 F11P03951 625 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 AKR7LQ8NHP1 331 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TTC9Q92623 222 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
VPS13A-204ENST00000376634 C7orf72A4D263 438 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TARM1B6A8C7 271 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ZNF195O14628 629 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ABCD3P28288 659 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
VPS13A-204ENST00000376634 VASH2Q86V25 355 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 SLCO4A1Q96BD0 722 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 FAAP24Q9BTP7 215 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 UBE2ZQ9H832 354 aaPredicted RBP11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 MRGPRX4Q96LA9 322 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 DENND4AQ7Z401 1863 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TNCP24821 2201 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 K7ESM1 405 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TNFRSF10CO14798 259 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 MMP11P24347 488 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ETFDHQ16134 617 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 B3GNT9Q6UX72 402 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 FBXL14Q8N1E6 418 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ZIC5Q96T25 663 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 NPY1RP25929 384 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 SLC19A1P41440 591 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 KIAA1958Q8N8K9 716 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 SMIM14Q96QK8 99 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 FAM53CQ9NYF3 392 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 HELTA6NFD8 242 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 PRDX4Q13162 271 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 CLDN23Q96B33 292 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 HRASP01112 189 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 GABRB1P18505 474 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 GCAP28676 217 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 SPATA46Q5T0L3 261 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 TMEM207Q6UWW9 146 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 RBM45Q8IUH3 476 aaKnown RBP11.28□□□□□ -0.6
VPS13A-204ENST00000376634 OR13H1Q8NG92 308 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 ARRDC2Q8TBH0 407 aa11.28□□□□□ -0.6
VPS13A-204ENST00000376634 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 SLC25A26Q70HW3 274 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 ELSPBP1Q96BH3 223 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 IGHV3-15A0A0B4J1V0 119 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 LIPAP38571 399 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 TRILQ7L0X0 811 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 OR1J1Q8NGS3 322 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 ZP3P21754 424 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 DUSP8Q13202 625 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.6
VPS13A-204ENST00000376634 TMEM56Q96MV1 263 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 ADGRL4Q9HBW9 690 aa11.27□□□□□ -0.6
VPS13A-204ENST00000376634 GDF2Q9UK05 429 aaPredicted RBP11.27□□□□□ -0.6
VPS13A-204ENST00000376634 C19orf53Q9UNZ5 99 aaPredicted RBP11.27□□□□□ -0.6
VPS13A-204ENST00000376634 CRYABP02511 175 aaKnown RBP11.27□□□□□ -0.61
VPS13A-204ENST00000376634 CST2P09228 141 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 PPOXP50336 477 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 RALYQ9UKM9 306 aaKnown RBP11.27□□□□□ -0.61
VPS13A-204ENST00000376634 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 TRGV8A0A0C4DH27 118 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 TSPAN12O95859 305 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 SP1P08047 785 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 FGF2P09038 288 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 ARIH2OSQ8N7S6 290 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 TEAD3Q99594 435 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 ASIC5Q9NY37 505 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 ZC3H12DA2A288 527 aaKnown RBP11.27□□□□□ -0.61
VPS13A-204ENST00000376634 SERTM1A2A2V5 107 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms