RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 UHRF2Q96PU4 802 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 ARV1Q9H2C2 271 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 PIGMQ9H3S5 423 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 MN1Q10571 1320 aaPredicted RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 DHRS3O75911 302 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 HMGN3Q15651 99 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 OR2A2Q6IF42 318 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 GPA33Q99795 319 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 TAAR5O14804 337 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 APOA2P02652 100 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 WNT1P04628 370 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 RPL12P30050 165 aaKnown RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 MVDP53602 400 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 HIST2H3PS2Q5TEC6 136 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 ZNF275Q9NSD4 429 aaPredicted RBP12.16□□□□□ -0.46
C9orf47-203ENST00000375851 TCFL5Q9UL49 500 aa12.16□□□□□ -0.46
C9orf47-203ENST00000375851 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
C9orf47-203ENST00000375851 GPR12P47775 334 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 TRIP6Q15654 476 aaKnown RBP12.15□□□□□ -0.46
C9orf47-203ENST00000375851 TMEM128Q5BJH2 165 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 MESTQ5EB52 335 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 PABPC1L2AQ5JQF8 200 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 SPANXN5Q5MJ07 72 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 RBMXL3Q8N7X1 1067 aaKnown RBP12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ZNF680Q8NEM1 530 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 TECTBQ96PL2 329 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ABHD1Q96SE0 405 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 DTX4Q9Y2E6 619 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 A0A1W2PPH5 198 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 HLA-HP01893 362 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 RAC3P60763 192 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 SSX9Q7RTT3 188 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ADGRG3Q86Y34 549 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 EXTL1Q92935 676 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 MIA3Q5JRA6 1907 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 CENPVL1A0A0U1RR11 272 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 OR5H15A6NDH6 313 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ALX3O95076 343 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 PATE4P0C8F1 98 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ERGP11308 486 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 PTGFRP43088 359 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ZFP36L2P47974 494 aaKnown RBP12.15□□□□□ -0.46
C9orf47-203ENST00000375851 SIGLEC14Q08ET2 396 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 SKP2Q13309 424 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 HES1Q14469 280 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 FAM122BQ7Z309 247 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 GALNT16Q8N428 558 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 DAZAP1Q96EP5 407 aaKnown RBP12.15□□□□□ -0.46
C9orf47-203ENST00000375851 PLSCR3Q9NRY6 295 aa12.15□□□□□ -0.46
C9orf47-203ENST00000375851 NDUFB6O95139 128 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 IL5P05113 134 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 AVPR2P30518 371 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 GNG3P63215 75 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 PDCD1Q15116 288 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 JMJD6Q6NYC1 403 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 TMEM272A0A1B0GTI8 110 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ZFP92A6NM28 416 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF354AO60765 605 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 IGHA1P01876 353 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CRYABP02511 175 aaKnown RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 OR8U8P0C7N1 319 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 FCARP24071 287 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ELLP55199 621 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 FOXC1Q12948 553 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 FAM185AQ8N0U4 392 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 SHARPINQ9H0F6 387 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 KCNIP2Q9NS61 270 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 CTAG2O75638 210 aa12.14□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF626Q68DY1 528 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms