RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CLVS2Q5SYC1 327 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 METTL11BQ5VVY1 283 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FBXW9Q5XUX1 488 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TMEM53Q6P2H8 277 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 IGFL3Q6UXB1 125 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NOXA1Q86UR1 476 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FAM89BQ8N5H3 189 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR56B1Q8NGI3 324 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR4D10Q8NGI6 311 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CMBLQ96DG6 245 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TECTBQ96PL2 329 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NICN1Q9BSH3 213 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 URM1Q9BTM9 101 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZMAT3Q9HA38 289 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PLSCR2Q9NRY7 297 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PRSS50Q9UI38 385 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 LOC100509620A0A075B734 347 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 EFSO43281 561 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 HLA-HP01893 362 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZP1P60852 638 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RPS27AP62979 156 aaKnown RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF92Q03936 586 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FJX1Q86VR8 437 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF584Q8IVC4 421 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CHST4Q8NCG5 386 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR1K1Q8NGR3 316 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NPRL2Q8WTW4 380 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TNFAIP8L1Q8WVP5 186 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PIGTQ969N2 578 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NPDC1Q9NQX5 325 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GPR173Q9NS66 373 aa15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ELF5Q9UKW6 265 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF503-AS2A6NEH8 195 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CRTAPO75718 401 aaPredicted RBP15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RAB3DO95716 219 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 IL18BPO95998 194 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 C1QBP02746 253 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PNLIPRP3Q17RR3 467 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GLDNQ6ZMI3 551 aaPredicted RBP15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 P4HA3Q7Z4N8 544 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZADH2Q8N4Q0 377 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TM2D1Q9BX74 207 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SELENOIQ9C0D9 397 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 C12orf49Q9H741 205 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ANAPC10Q9UM13 185 aa15.62■□□□□ 0.09
HLA-DQB1-201ENST00000374943 FOXI3A8MTJ6 420 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF736B4DX44 427 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SULT1A3P0DMM9 295 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SULT1A4P0DMN0 295 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 HIST1H1DP16402 221 aaKnown RBP15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MEF2DQ14814 521 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GUSBP1Q15486 140 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SLC22A6Q4U2R8 563 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 LHFPL2Q6ZUX7 228 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 C1QL2Q7Z5L3 287 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TRAPPC6BQ86SZ2 158 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 STEAP2Q8NFT2 490 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR11H7Q8NGC8 314 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR51S1Q8NGJ8 323 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 BCL2L2Q92843 193 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SARAFQ96BY9 339 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RAB3CQ96E17 227 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GINS4Q9BRT9 223 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 BANF2Q9H503 90 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ING4Q9UNL4 249 aa15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 KMT2BQ9UMN6 2715 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF816-ZNF321PA0A0X1KG74 233 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 A0A1W2PP11 408 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NRASP01111 189 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GNB3P16520 340 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MPZP25189 248 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RAB1AP62820 205 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF169Q14929 603 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PLAC9Q5JTB6 97 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR5D18Q8NGL1 313 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OR8S1Q8NH09 359 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NANOS1Q8WY41 292 aaKnown RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 DVL3Q92997 716 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 APOBEC3DQ96AK3 386 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 POM121L2Q96KW2 1035 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 S100A13Q99584 98 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 EPG5Q9HCE0 2579 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SNRPGP15A8MWD9 76 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PYCARD-AS1I3L0S3 204 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MFNGO00587 321 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SOCS1O15524 211 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SSX5O60225 188 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 HPXP02790 462 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SERPINA5P05154 406 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZNF735P0CB33 412 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 CD79AP11912 226 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MGMTP16455 207 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TBPP20226 339 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ERP29P30040 261 aaKnown RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GZMKP49863 264 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 MTCP1P56278 107 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PLP2Q04941 152 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ZMYND11Q15326 602 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms