RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CRLF2Q9HC73 371 aa14.97□□□□□ -0.01
RXRB-201ENST00000374680 SHANK1Q9Y566 2161 aa14.97□□□□□ -0.01
RXRB-201ENST00000374680 RNF222A6NCQ9 220 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 M0R135 149 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 DKK1O94907 266 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 SRYQ05066 204 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 TAF9Q16594 264 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 INO80EQ8NBZ0 244 aaPredicted RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 MITD1Q8WV92 249 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 ZNF799Q96GE5 643 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 COL5A1P20908 1838 aaPredicted RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 B8ZZF3 427 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 CXCL13O43927 109 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 LCATP04180 440 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 LIFP15018 202 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 WIPI1Q5MNZ9 446 aaPredicted RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 GTPBP8Q8N3Z3 284 aaPredicted RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 PNLDC1Q8NA58 520 aaKnown RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 GJC3Q8NFK1 279 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 PTX4Q96A99 478 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 IMMP1LQ96LU5 166 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 CHMP1AQ9HD42 196 aaPredicted RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 NUP50Q9UKX7 468 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 DSPP15924 2871 aaKnown RBP14.96□□□□□ -0.01
RXRB-201ENST00000374680 ADAMTS20P59510 1910 aa14.96□□□□□ -0.01
RXRB-201ENST00000374680 SFTPBP07988 381 aa14.96□□□□□ -0.02
RXRB-201ENST00000374680 TMEM185AQ8NFB2 350 aa14.96□□□□□ -0.02
RXRB-201ENST00000374680 URM1Q9BTM9 101 aaKnown RBP14.96□□□□□ -0.02
RXRB-201ENST00000374680 NELFAQ9H3P2 528 aa14.96□□□□□ -0.02
RXRB-201ENST00000374680 TNFSF18Q9UNG2 199 aa14.96□□□□□ -0.02
RXRB-201ENST00000374680 NBEAQ8NFP9 2946 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 ETV2O00321 342 aaPredicted RBP14.95□□□□□ -0.02
RXRB-201ENST00000374680 MELTFP08582 738 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 CCNOP22674 350 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 MTCP1P56278 107 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 PGAP1Q75T13 922 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 PXT1Q8NFP0 134 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 SLC25A43Q8WUT9 341 aaPredicted RBP14.95□□□□□ -0.02
RXRB-201ENST00000374680 RNF138Q8WVD3 245 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 CCDC187A0A096LP49 1063 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 IGLV3-32A0A0A0MS00 114 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 LOC105371267A0A1B0GV96 52 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 CD63P08962 238 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 TCN2P20062 427 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 ACKR3P25106 362 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 S100A10P60903 97 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 ZNF529Q6P280 563 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 CLEC18BQ6UXF7 455 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 ZIC4Q8N9L1 334 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 OR13G1Q8NGZ3 307 aa14.95□□□□□ -0.02
RXRB-201ENST00000374680 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
RXRB-201ENST00000374680 CHRM2P08172 466 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 AGTR1P30556 359 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 TMEM230Q96A57 120 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 FAAP24Q9BTP7 215 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 PLEKHJ1Q9NW61 149 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 FGF5P12034 268 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 H3F3AP84243 136 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 HIST3H3Q16695 136 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 ANKRD55Q3KP44 614 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 OR2W3Q7Z3T1 314 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 BVESQ8NE79 360 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 OR56B1Q8NGI3 324 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 RRNAD1Q96FB5 475 aaKnown RBP14.94□□□□□ -0.02
RXRB-201ENST00000374680 PIGQQ9BRB3 760 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 ASF1BQ9NVP2 202 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 CFAP47Q6ZTR5 3102 aa14.94□□□□□ -0.02
RXRB-201ENST00000374680 MSGN1A6NI15 193 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 HPNP05981 417 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 GRB2P62993 217 aaKnown RBP14.93□□□□□ -0.02
RXRB-201ENST00000374680 HGFACQ04756 655 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 FGL1Q08830 312 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 CHRFAM7AQ494W8 412 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 HOGA1Q86XE5 327 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 DTWD2Q8NBA8 298 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 OR51F2Q8NH61 342 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 FGFBP3Q8TAT2 258 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 SGK3Q96BR1 496 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 ZNF845Q96IR2 970 aaPredicted RBP14.93□□□□□ -0.02
RXRB-201ENST00000374680 FANCFQ9NPI8 374 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 BDP1A6H8Y1 2624 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 H0YIZ8 118 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 HOXD4P09016 255 aaPredicted RBP14.93□□□□□ -0.02
RXRB-201ENST00000374680 M6PRP20645 277 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 PSMB6P28072 239 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 FOLR3P41439 243 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 RGS19P49795 217 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 DSCR4P56555 118 aaPredicted RBP14.93□□□□□ -0.02
RXRB-201ENST00000374680 CLEC9AQ6UXN8 241 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 KCNRGQ8N5I3 272 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 PAQR8Q8TEZ7 354 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 TOMM40LQ969M1 308 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 NABP1Q96AH0 204 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 OR10C1Q96KK4 312 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 SLC26A1Q9H2B4 701 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 MCTS1Q9ULC4 181 aaKnown RBP14.93□□□□□ -0.02
RXRB-201ENST00000374680 A0A0D9SG52 128 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 LAMTOR5O43504 91 aa14.93□□□□□ -0.02
RXRB-201ENST00000374680 HPP00738 406 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms