RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 TMEM176BQ3YBM2 270 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CCDC54Q8NEL0 328 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SPACA9Q96E40 222 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 RTBDNQ9BSG5 229 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CRB3Q9BUF7 120 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 DEFB126Q9BYW3 111 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 C1orf123Q9NWV4 160 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 LPAR3Q9UBY5 353 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CARHSP1Q9Y2V2 147 aaKnown RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 RAD51DO75771 328 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 DHRS3O75911 302 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 HTR3BO95264 441 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 CSTBP04080 98 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 MYF5P13349 255 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 PVALBP20472 110 aaPredicted RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 MSR1P21757 451 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 RBMXP38159 391 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 PTGDSP41222 190 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 AKR1C2P52895 323 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 PUSL1Q8N0Z8 303 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 C10orf35Q96D05 121 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SOX7Q9BT81 388 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SLC26A1Q9H2B4 701 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 NELFAQ9H3P2 528 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF319Q9P2F9 582 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 OSGIN2Q9Y236 505 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 A0A0U1RQV5 110 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 A0A1W2PP11 408 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 H0YIZ8 118 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 CA11O75493 328 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 ACTL6AO96019 429 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 IFNA2P01563 188 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 PI3P19957 117 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SERPINA2P20848 420 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 CSNK1A1P48729 337 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 CLDN17P56750 224 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 S100A10P60903 97 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SMAD2Q15796 467 aaKnown RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 C10orf91Q5T1B1 145 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 AADACL3Q5VUY0 350 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 H3F3CQ6NXT2 135 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 RNF144BQ7Z419 303 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 RTN4RL2Q86UN3 420 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 OR13G1Q8NGZ3 307 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 CPNE2Q96FN4 548 aaPredicted RBP10.05□□□□□ -0.8
PTPN20-204ENST00000374346 OR2S2Q9NQN1 319 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF175Q9Y473 711 aa10.05□□□□□ -0.8
PTPN20-204ENST00000374346 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 F5H5K5 113 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 MBTPS2O43462 519 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 NDUFA2O43678 99 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 H2AFB1P0C5Y9 115 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 PNLIPP16233 465 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF133P52736 654 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-204ENST00000374346 RAB32Q13637 225 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 TMPPEQ6ZT21 453 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 RAB11FIP2Q7L804 512 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 OR5D18Q8NGL1 313 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-204ENST00000374346 PECRQ9BY49 303 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF576Q9H609 170 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 ELL3Q9HB65 397 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-204ENST00000374346 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF701Q9NV72 531 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-204ENST00000374346 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 OR5AC2Q9NZP5 309 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 PCDHGA1Q9Y5H4 931 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 B3GALT1Q9Y5Z6 326 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 A0A087WZY1 265 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 SDCBPO00560 298 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-204ENST00000374346 VAMP5O95183 116 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 KNG1P01042 644 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 IFNA21P01568 189 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 CYC1P08574 325 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 NAT2P11245 290 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 GLRA1P23415 457 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 SLC16A14Q7RTX9 510 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 GALNTL5Q7Z4T8 443 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 SULF2Q8IWU5 870 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 SGPP2Q8IWX5 399 aa10.04□□□□□ -0.8
PTPN20-204ENST00000374346 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms