RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 MFSD9Q8NBP5 474 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 LPAR4Q99677 370 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CBLN4Q9NTU7 201 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 K7N7A8 449 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CHRM2P08172 466 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF888P0CJ79 500 aaPredicted RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 METAP1P53582 386 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 RND3P61587 244 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 ABLIM2Q6H8Q1 611 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 TANGO2Q6ICL3 276 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 NKAIN3Q8N8D7 197 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 THOC3Q96J01 351 aaKnown RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 NIPSNAP3BQ9BS92 247 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 SUSD2Q9UGT4 822 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CD207Q9UJ71 328 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 OR52A1Q9UKL2 312 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 SCGNO76038 276 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 RENP00797 406 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 OR5AC1P0C628 307 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 ERVFC1-1P60608 527 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 QRFPP83859 136 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 H3F3AP84243 136 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 DPTQ07507 201 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 FAM53BQ14153 422 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 MLF2Q15773 248 aaPredicted RBP11.44□□□□□ -0.58
PRPF4-201ENST00000374198 LCN10Q6JVE6 187 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 SLC35E3Q7Z769 313 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 NPRL2Q8WTW4 380 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 IGKV1D-42A0A075B6H8 117 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
PRPF4-201ENST00000374198 AADACL3Q5VUY0 350 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 TMEM182Q6ZP80 229 aaPredicted RBP11.44□□□□□ -0.58
PRPF4-201ENST00000374198 SLC35G3Q8N808 338 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 OR2L3Q8NG85 312 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 FNDC9Q8TBE3 224 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 SLC22A18Q96BI1 424 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.44□□□□□ -0.58
PRPF4-201ENST00000374198 C1orf123Q9NWV4 160 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 HHLA2Q9UM44 414 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 CYP8B1Q9UNU6 501 aa11.44□□□□□ -0.58
PRPF4-201ENST00000374198 TK1P04183 234 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 RPLP1P05386 114 aaKnown RBP11.43□□□□□ -0.58
PRPF4-201ENST00000374198 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 GLO1Q04760 184 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 EMC4Q5J8M3 183 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 LHFPL1Q86WI0 220 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 OR2L8Q8NGY9 312 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 OR13G1Q8NGZ3 307 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 OR1P1Q8NH06 330 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 TSPAN32Q96QS1 320 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 SYT3Q9BQG1 590 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 ASCL3Q9NQ33 180 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 DKKL1Q9UK85 242 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 MYOFQ9NZM1 2061 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 TRBV23OR9-2A0A075B6M9 112 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 E5RGE8 158 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 CTSVO60911 334 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 HLA-DQA2P01906 255 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 OR4A8P0C604 315 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 PGA3P0DJD8 388 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 THEGLP0DJG4 465 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 EPHA1P21709 976 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 TLX1P31314 330 aaPredicted RBP11.43□□□□□ -0.58
PRPF4-201ENST00000374198 PAX5Q02548 391 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 SQSTM1Q13501 440 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 RUNX2Q13950 521 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 SSPNQ14714 243 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF74Q16587 644 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 PLXDC2Q6UX71 529 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 SGPP2Q8IWX5 399 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 CYB561D1Q8N8Q1 229 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 RHBDD1Q8TEB9 315 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 WFIKKN2Q8TEU8 576 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 NUDT16L1Q9BRJ7 211 aaKnown RBP11.43□□□□□ -0.58
PRPF4-201ENST00000374198 CDH20Q9HBT6 801 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 NSG2Q9Y328 171 aa11.43□□□□□ -0.58
PRPF4-201ENST00000374198 B4DEV8 164 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 M0QZK8 103 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 LMX1BO60663 402 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 GGCTO75223 188 aaKnown RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 NKX2-2O95096 273 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 BPNT1O95861 308 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 SCGB1D2O95969 90 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 CEBPBP17676 345 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 RBMXP38159 391 aaKnown RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 RND2P52198 227 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 ROM1Q03395 351 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 C1QL3Q5VWW1 255 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF385AQ96PM9 386 aaKnown RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 OSGIN2Q9Y236 505 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms