RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RAF1P04049 648 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 SDHAP31040 664 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 YBX1P67809 324 aaKnown RBP12.89□□□□□ -0.35
TRAF1-201ENST00000373887 FOXF1Q12946 379 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 COL13A1Q5TAT6 717 aaPredicted RBP12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ACSM5Q6NUN0 579 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 CXorf67Q86X51 503 aaPredicted RBP12.89□□□□□ -0.35
TRAF1-201ENST00000373887 PBOV1Q9GZY1 135 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 UPK1AO00322 258 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 HSBP1O75506 76 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 CRYAAP02489 173 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 GNG10P50151 68 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 RAB1AP62820 205 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 PLA1AQ53H76 456 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 STUMQ69YW2 141 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 TMEM179BQ7Z7N9 219 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 OR2A14Q96R47 310 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ADGRL4Q9HBW9 690 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 PAPPAQ13219 1627 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 HMX2A2RU54 273 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 PPP1CBP62140 327 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ZXDAP98168 799 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 TCTN1Q2MV58 587 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 CTU2Q2VPK5 515 aaKnown RBP12.89□□□□□ -0.35
TRAF1-201ENST00000373887 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 TNFRSF19Q9NS68 423 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 OPN1MWP04001 364 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 OPN1MW2P0DN77 364 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 OPN1MW3P0DN78 364 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 SOX18P35713 384 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ANKRD53Q8N9V6 530 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 GPX5O75715 221 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ALX3O95076 343 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 NID1P14543 1247 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 PCK2Q16822 640 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 GPX8Q8TED1 209 aa12.89□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF26P17031 533 aaPredicted RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 CDAP32320 146 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 K7EQS6 105 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 CISD3P0C7P0 127 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 GPM6AP51674 278 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 C16orf47Q6ZP98 133 aaPredicted RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 PRR7Q8TB68 274 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 ISL2Q96A47 359 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 MEX3AA1L020 520 aaKnown RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 CEBPEQ15744 281 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 PELI3Q8N2H9 469 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 LAT2Q9GZY6 243 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 BMP5P22003 454 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 RPL18Q07020 188 aaKnown RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 GAMTQ14353 236 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 FCRL6Q6DN72 434 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
TRAF1-201ENST00000373887 SPRY3O43610 288 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 FAM3AP98173 230 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 SLC25A26Q70HW3 274 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
TRAF1-201ENST00000373887 ACOT8O14734 319 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 CST7O76096 145 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 GP2P55259 537 aaKnown RBP12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ASAH1Q13510 395 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 Q6ZNX1 250 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 GABARAPL1Q9H0R8 117 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 OR5H8P0DN80 308 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 PAX5Q02548 391 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 PRSS41Q7RTY9 318 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 KMT5CQ86Y97 462 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 OR1L4Q8NGR5 311 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 KISS1RQ969F8 398 aaPredicted RBP12.87□□□□□ -0.35
TRAF1-201ENST00000373887 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ALKBH3Q96Q83 286 aaPredicted RBP12.87□□□□□ -0.35
TRAF1-201ENST00000373887 NRTNQ99748 197 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
TRAF1-201ENST00000373887 CYR61O00622 381 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 MOGAT2Q3SYC2 334 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 C17orf78Q8N4C9 275 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 CA5BP1Q8WTZ4 195 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 MRGPRX3Q96LB0 322 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms