RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 TRAPPC1Q9Y5R8 145 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 IGLV3-16A0A075B6K0 115 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 B4DEV8 164 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 HOXC4P09017 264 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 CTGFP29279 349 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 MMP16P51512 607 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 CLN3Q13286 438 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 ENDOGQ14249 297 aaKnown RBP10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 FZD2Q14332 565 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 LY6G5CQ5SRR4 150 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 ASTLQ6HA08 431 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 TMEM25Q86YD3 366 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 RIMS4Q9H426 269 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 KLK13Q9UKR3 277 aa10.06□□□□□ -0.8
SYNPO2L-201ENST00000372873 A0A1W2PPC1 479 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 CD5P06127 495 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 PSMB3P49720 205 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 RAB38P57729 211 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 MLC1Q15049 377 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 FCRL6Q6DN72 434 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 NRSN1Q8IZ57 195 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 OR5R1Q8NH85 324 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 TMEM9BQ9NQ34 198 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 SLC2A9Q9NRM0 540 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 KLHL13Q9P2N7 655 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 NAGKQ9UJ70 344 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 INSL5Q9Y5Q6 135 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 LAMA3Q16787 3333 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 OR4C45A6NMZ5 311 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 C9J4A7 227 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 APLNRP35414 380 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 PIGPP57054 158 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 VITQ6UXI7 678 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 TMEM183AQ8IXX5 376 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 ZNF439Q8NDP4 499 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 MS4A6EQ96DS6 147 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 PGAM5Q96HS1 289 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 RCL1Q9Y2P8 373 aaKnown RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 SSSCA1O60232 199 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 CSF2RAP15509 400 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 BCL6P41182 706 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 CSNK1A1P48729 337 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 DMRTC1Q5HYR2 192 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 APCDD1LQ8NCL9 501 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 LHX4Q969G2 390 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 BET1LQ9NYM9 111 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 ENTPD2Q9Y5L3 495 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 BRCA2P51587 3418 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 A0A1B0GTI1 187 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 SLC31A1O15431 190 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 TBX19O60806 448 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 CD160O95971 181 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 GAPDHP04406 335 aaKnown RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 UNQ9370/PRO34162Q6UXP9 181 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 OR51A2Q8NGJ7 313 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 RTN4IP1Q8WWV3 396 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 OIT3Q8WWZ8 545 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 KISS1RQ969F8 398 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 MFRPQ9BY79 579 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 PRODH2Q9UF12 536 aa10.05□□□□□ -0.8
SYNPO2L-201ENST00000372873 RP1P56715 2156 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 CACNA1IQ9P0X4 2223 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 FCGR3AP08637 254 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 RAB7AP51149 207 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 TPGS2Q68CL5 300 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 KIRREL2Q6UWL6 708 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 BTNL8Q6UX41 500 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 ZNF664Q8N3J9 261 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 DMBX1Q8NFW5 382 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 OR8D2Q9GZM6 311 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 SLC2A8Q9NY64 477 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 B9D1Q9UPM9 204 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 F8VVB4 439 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 F8VWA3 439 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 NTF3P20783 257 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 CDKN2AP42771 156 aaKnown RBP10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 WDR25Q64LD2 544 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 BEND2Q8NDZ0 799 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 SPACA7Q96KW9 195 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 SLC26A1Q9H2B4 701 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 HEBP2Q9Y5Z4 205 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 FAM24AA6NFZ4 105 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 TGM5O43548 720 aa10.04□□□□□ -0.8
SYNPO2L-201ENST00000372873 HKR1P10072 659 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms