RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
PTPRF-203ENST00000372407 METTL15P1P0C7V9 234 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 SCAND1P57086 179 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF90Q03938 601 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 BTNL8Q6UX41 500 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 DEFB108BQ8NET1 73 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ANGPTL7O43827 346 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 PTHLHP12272 177 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 PCMT1P22061 227 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 DMRTC1Q5HYR2 192 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF321PQ8N8H1 164 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 KDF1Q8NAX2 398 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-203ENST00000372407 BOD1Q96IK1 185 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 OR2A5Q96R48 311 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 CACFD1Q9UGQ2 172 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 IGHV3-15A0A0B4J1V0 119 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 WNT1P04628 370 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ABCD3P28288 659 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 UBE2G2P60604 165 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 TCTN1Q2MV58 587 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF718Q3SXZ3 478 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 RNF212Q495C1 297 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 KIAA1958Q8N8K9 716 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 NOXO1Q8NFA2 376 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ALKBH3Q96Q83 286 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-203ENST00000372407 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 CYB5R1Q9UHQ9 305 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 IAPPP10997 89 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 GABRG2P18507 467 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 TFF2Q03403 129 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ANKRD16Q6P6B7 361 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 AKR7LQ8NHP1 331 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 UQCC2Q9BRT2 126 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 COMMD5Q9GZQ3 224 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 EXOGQ9Y2C4 368 aaKnown RBP10.26□□□□□ -0.77
PTPRF-203ENST00000372407 CT45A10P0DMU9 189 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 C21orf58P58505 322 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 COMMD1Q8N668 190 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 OR2V1Q8NHB1 315 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 PRRX2Q99811 253 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 SOX7Q9BT81 388 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 NDRG3Q9UGV2 375 aa10.26□□□□□ -0.77
PTPRF-203ENST00000372407 ST3GAL2Q16842 350 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 DBX2Q6ZNG2 339 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 TP53I13Q8NBR0 393 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CPEB3Q8NE35 698 aaKnown RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 TECTBQ96PL2 329 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 FOXB1Q99853 325 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 LRRC61Q9BV99 259 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 FBXO4Q9UKT5 387 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 SCN1AP35498 2009 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CLEC18AA5D8T8 446 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 GPR31O00270 319 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 ABCD4O14678 606 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 EPPINO95925 133 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 ACSM4P0C7M7 580 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 RRASP10301 218 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CPN1P15169 458 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 PPIAP62937 165 aaKnown RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 MYBPHQ13203 477 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 INSL4Q14641 139 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 UQCC3Q6UW78 93 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 LRRTM1Q86UE6 522 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CLEC18CQ8NCF0 446 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 MRGPRX3Q96LB0 322 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 GINS3Q9BRX5 216 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 DNAJB12Q9NXW2 375 aaKnown RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 OR5V1Q9UGF6 321 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 AQP7O14520 342 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 OR7C2O60412 319 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 CDAP32320 146 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 RAB13P51153 203 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 DHRS2Q13268 280 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 ADGRG3Q86Y34 549 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 APOBEC3DQ96AK3 386 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-203ENST00000372407 ABHD1Q96SE0 405 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 ADGRL4Q9HBW9 690 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 V9GYS6 101 aa10.25□□□□□ -0.77
PTPRF-203ENST00000372407 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 H3BP45 60 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 MASP2O00187 686 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 PRRG2O14669 202 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms