RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 S1PR3Q99500 378 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 ULBP2Q9BZM5 246 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 PDFQ9HBH1 243 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 MOKQ9UQ07 419 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 GPR55Q9Y2T6 319 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TCRBV5S1A1TA0A578 114 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 MAP1LC3B2A6NCE7 125 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 UTS2O95399 124 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 IL3RAP26951 378 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 GPR3P46089 330 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 LTC4SQ16873 150 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 MAP1LC3BQ9GZQ8 125 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 ZNF253O75346 499 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 IL24Q13007 206 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 NPSR1Q6W5P4 371 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 ERASQ7Z444 233 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TMEM106AQ96A25 262 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 SPTY2D1-AS1A0A0U1RR47 76 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TSPAN12O95859 305 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 NPBWR2P48146 333 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 SNRPNP63162 240 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 TSPAN31Q12999 210 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 OR8G1Q15617 311 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 GAB4Q2WGN9 574 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 HRASLS5Q96KN8 279 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 EGLN2Q96KS0 407 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 SNX22Q96L94 193 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 ZNF583Q96ND8 569 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 LRRC61Q9BV99 259 aa12.72□□□□□ -0.37
RAPGEF1-202ENST00000372190 MT-CO3P00414 261 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 SMIM18P0DKX4 95 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 ARRB2P32121 409 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 FAM209AQ5JX71 171 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 MBOAT4Q96T53 435 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 TIMM9Q9Y5J7 89 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 LOC107984156A0A0G2JMH3 177 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 TMEM210A6NLX4 147 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 HLA-DRB3P79483 266 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 MED25Q71SY5 747 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 ARL17AQ8IVW1 177 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 OR2T10Q8NGZ9 312 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 OR51F2Q8NH61 342 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 OPN3Q9H1Y3 402 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 MBD1Q9UIS9 605 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 SLC19A1P41440 591 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 LIM2P55344 173 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 KCNJ10P78508 379 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 CCSMST1Q4G0I0 132 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 FAM78BQ5VT40 261 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 ZNF385CQ66K41 422 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 OR52I2Q8NH67 350 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 GNB4Q9HAV0 340 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 NDUFB11Q9NX14 153 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
RAPGEF1-202ENST00000372190 GOLGA4Q13439 2230 aaKnown RBP12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 CORTO00230 105 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 ABHD16AO95870 558 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR4E1P0C645 316 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 RPA2P15927 270 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 SYPL1Q16563 259 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 TMEM64Q6YI46 380 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 AAED1Q7RTV5 226 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PTRH1Q86Y79 214 aaKnown RBP12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 SFRP2Q96HF1 295 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 KCNK15Q9H427 330 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZNF732B4DXR9 585 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 LMO7DNF2Z398 122 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 LRP3O75074 770 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 CTXN2P0C2S0 81 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 PELI3Q8N2H9 469 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR5D13Q8NGL4 314 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR52N1Q8NH53 320 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 VCX2Q9H322 139 aa12.71□□□□□ -0.38
RAPGEF1-202ENST00000372190 SLC5A10A0PJK1 596 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 LRRC3CA6NJW4 275 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR8G3PP0DMU2 310 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 SMRP1Q8NCR6 262 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR10A7Q8NGE5 316 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms