RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 OLIG3Q7RTU3 272 aa13□□□□□ -0.33
LMO4-201ENST00000370542 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
LMO4-201ENST00000370542 KISS1RQ969F8 398 aaPredicted RBP13□□□□□ -0.33
LMO4-201ENST00000370542 ZG16BQ96DA0 208 aa13□□□□□ -0.33
LMO4-201ENST00000370542 MRPS24Q96EL2 167 aaKnown RBP13□□□□□ -0.33
LMO4-201ENST00000370542 CHIAQ9BZP6 476 aa13□□□□□ -0.33
LMO4-201ENST00000370542 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
LMO4-201ENST00000370542 QRSL1Q9H0R6 528 aaKnown RBP13□□□□□ -0.33
LMO4-201ENST00000370542 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
LMO4-201ENST00000370542 SERINC1Q9NRX5 453 aa13□□□□□ -0.33
LMO4-201ENST00000370542 OPN4Q9UHM6 478 aa13□□□□□ -0.33
LMO4-201ENST00000370542 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
LMO4-201ENST00000370542 DPRXA6NFQ7 191 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF716A6NP11 495 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 DNPH1O43598 174 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ADAM11O75078 769 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF432O94892 652 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 OR2F2O95006 317 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 PMS2P2O95744 297 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 SOD3P08294 240 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 SLC2A5P22732 501 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 SLC6A6P31641 620 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 GPR4P46093 362 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 SLC16A1P53985 500 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 CSNK2A1P68400 391 aaPredicted RBP12.99□□□□□ -0.33
LMO4-201ENST00000370542 H3F3AP84243 136 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF85Q03923 595 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 OR2F1Q13607 317 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF345Q14585 488 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF672Q499Z4 452 aaPredicted RBP12.99□□□□□ -0.33
LMO4-201ENST00000370542 SLC35D3Q5M8T2 416 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 TIMM23BQ5SRD1 257 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
LMO4-201ENST00000370542 NKAIN4Q8IVV8 208 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ZNF619Q8N2I2 560 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 HAVCR1Q96D42 359 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 OR5B2Q96R09 309 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 TRIM2Q9C040 744 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
LMO4-201ENST00000370542 ADGRL4Q9HBW9 690 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 PRSS50Q9UI38 385 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 LAMP3Q9UQV4 416 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 WDR45Q9Y484 360 aa12.99□□□□□ -0.33
LMO4-201ENST00000370542 IFITM5A6NNB3 132 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 F12P00748 615 aaPredicted RBP12.98□□□□□ -0.33
LMO4-201ENST00000370542 APOC3P02656 99 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 CD3EP07766 207 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 IGHV1-2P23083 117 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 PYCR1P32322 319 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 NTF4P34130 210 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 CCR4P51679 360 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 ATP5J2P56134 94 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
LMO4-201ENST00000370542 KRTAP1-1Q07627 177 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
LMO4-201ENST00000370542 SVBPQ8N300 66 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 OR2AK2Q8NG84 335 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 PCNPQ8WW12 178 aaKnown RBP12.98□□□□□ -0.33
LMO4-201ENST00000370542 SEC22CQ9BRL7 303 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 MLXQ9UH92 298 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 IL20RAQ9UHF4 553 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 FOXJ3Q9UPW0 622 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 HDGFL3Q9Y3E1 203 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 V9GY05 133 aa12.98□□□□□ -0.33
LMO4-201ENST00000370542 ANK2Q01484 3957 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 SONP18583 2426 aaKnown RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 ACOD1A6NK06 481 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 SULT2B1O00204 365 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ARPC5O15511 151 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 RBBP9O75884 186 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 SLC2A10O95528 541 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 CD8AP01732 235 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 MPGP29372 298 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 BSPH1Q075Z2 132 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 SRSF4Q08170 494 aaKnown RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 MICBQ29980 383 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 TMEM69Q5SWH9 247 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ZNF660Q6AZW8 331 aaPredicted RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 MOB3CQ70IA8 216 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 DTX2Q86UW9 622 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 VRK2Q86Y07 508 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 GLB1L2Q8IW92 636 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 SPAG16Q8N0X2 631 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ZNF433Q8N7K0 673 aaPredicted RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 OR6N1Q8NGY5 312 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 RPS4Y2Q8TD47 263 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ARL5BQ96KC2 179 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 CNN2Q99439 309 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms