RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MVB12AQ96EY5 273 aa11.26□□□□□ -0.61
TPR-201ENST00000367478 ACER3Q9NUN7 267 aa11.26□□□□□ -0.61
TPR-201ENST00000367478 M0R2Z0 102 aa11.26□□□□□ -0.61
TPR-201ENST00000367478 SRSF9Q13242 221 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPR-201ENST00000367478 ZNF766Q5HY98 468 aa11.26□□□□□ -0.61
TPR-201ENST00000367478 ZDHHC16Q969W1 377 aa11.26□□□□□ -0.61
TPR-201ENST00000367478 HOXD9P28356 352 aaPredicted RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 ZC3HAV1LQ96H79 300 aaKnown RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 POMT2Q9UKY4 750 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 C19orf53Q9UNZ5 99 aaPredicted RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 TNFRSF10CO14798 259 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 FAM71E1Q6IPT2 247 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 PERPQ96FX8 193 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 CD99P14209 185 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 NKAIN1Q4KMZ8 207 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 STAC2Q6ZMT1 411 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 SLC6A1P30531 599 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 POLR2IP36954 125 aaKnown RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 MLF1P58340 268 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 PDXPQ96GD0 296 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 PBOV1Q9GZY1 135 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 SCN1AP35498 2009 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 HAAOP46952 286 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 OR1C1Q15619 314 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 HLA-BQ31612 363 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 METRNLQ641Q3 311 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 LRRTM3Q86VH5 581 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 OR2J2O76002 312 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 CSF2RBP32927 897 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 OPRK1P41145 380 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 RACK1P63244 317 aaKnown RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 RCL1Q9Y2P8 373 aaKnown RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 PRSS1P07477 247 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 THBS4P35443 961 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 RIGQ13278 110 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
TPR-201ENST00000367478 SDF2Q99470 211 aa11.25□□□□□ -0.61
TPR-201ENST00000367478 CD3DP04234 171 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 CLEC2LP0C7M8 214 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 HOXA4Q00056 320 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 ERASQ7Z444 233 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 SLC16A11Q8NCK7 471 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 CD226Q15762 336 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 PRSS42Q7Z5A4 293 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 SDCBPO00560 298 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 HOXC11O43248 304 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 CCL11P51671 97 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 RDH5Q92781 318 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 TMEM208Q9BTX3 173 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 ZNF426Q9BUY5 554 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 COX6CP09669 75 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 EPXP11678 715 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 CD96P40200 585 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 PTDSS2Q9BVG9 487 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 MMP24Q9Y5R2 645 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 ZNF737O75373 536 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 CLLU1OSQ5K130 101 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 CGB2Q6NT52 195 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 MRPL43Q8N983 215 aaKnown RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 OR52N5Q8NH56 324 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 TEX101Q9BY14 249 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 Q9N2K0 584 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 RPS4Y1P22090 263 aaKnown RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 Q56UQ5 140 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 OR2W3Q7Z3T1 314 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 ZNF547Q8IVP9 402 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 TMEM174Q8WUU8 243 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 COL25A1Q9BXS0 654 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 NALCNQ8IZF0 1738 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 PPP6CO00743 305 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 PCSK6P29122 969 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 DUSP5Q16690 384 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 GLDNQ6ZMI3 551 aaPredicted RBP11.24□□□□□ -0.61
TPR-201ENST00000367478 TAAR3PQ9P1P4 343 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
TPR-201ENST00000367478 C21orf58P58505 322 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 PFN3P60673 137 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 ACP1P24666 158 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 MEOX2P50222 304 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 TP53INP2Q8IXH6 220 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 PELI3Q8N2H9 469 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 GPX7Q96SL4 187 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms