RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 RREB1Q92766 1687 aa10.06□□□□□ -0.8
CDC42BPA-205ENST00000366769 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 HMSDA8MTL9 139 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 FXYD1O00168 92 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 INHBBP09529 407 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 INPP5JQ15735 1006 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 THEM4Q5T1C6 240 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 B3GAT1Q9P2W7 334 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 DOCK4Q8N1I0 1966 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 F5H697 171 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 NMBP08949 121 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 LGI3Q8N145 548 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 OR2M3Q8NG83 312 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 GPR32P1Q8NGA4 272 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 WSB1Q9Y6I7 421 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PRAMEF25A6NGN4 478 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TMEM267Q0VDI3 215 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PRAMEF5Q5TYX0 476 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PRAMEF6Q5VXH4 476 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 DHRS7BQ6IAN0 325 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 NPSR1Q6W5P4 371 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 STACQ99469 402 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 BANF2Q9H503 90 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 MED1Q15648 1581 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 LANCL1O43813 399 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 IGSF8Q969P0 613 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RAB33BQ9H082 229 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 CYSLTR2Q9NS75 346 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 A0A0J9YY10 115 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 M0QZ24 198 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 MPC1LP0DKB6 136 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RCC1P18754 421 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 OR1D4P47884 311 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 ZNF79Q15937 498 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 LBX2Q6XYB7 198 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 STPG2Q8N412 459 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 ACER3Q9NUN7 267 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 ANKRD10Q9NXR5 420 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 NTNG1Q9Y2I2 539 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 GPR55Q9Y2T6 319 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 ADRA2CP18825 462 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 ZNF385BQ569K4 471 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 MRM1Q6IN84 353 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 GSX1Q9H4S2 264 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PHIPQ8WWQ0 1821 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RGRP47804 291 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TNFRSF9Q07011 255 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TWSG1Q9GZX9 223 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 KCNK15Q9H427 330 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 GNG7O60262 68 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 MENTQ9BUN1 341 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PVRP15151 417 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RBM11P57052 281 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 RBM45Q8IUH3 476 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 OR5M9Q8NGP3 310 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PIGTQ969N2 578 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 TCTN2Q96GX1 697 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 PIGLQ9Y2B2 252 aa10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-205ENST00000366769 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ATF1P18846 271 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 DUSP1P28562 367 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 CD1BP29016 333 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 Q56UQ5 140 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 LYSMD4Q5XG99 296 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 TMEM208Q9BTX3 173 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 DNMT3BQ9UBC3 853 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 A0A0G2JLL6 359 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 M0R2Z0 102 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 MASP2O00187 686 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 CTAG1AP78358 180 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 PRRT2Q7Z6L0 340 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ZNF547Q8IVP9 402 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 RTN4IP1Q8WWV3 396 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 TMEM230Q96A57 120 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ZNF785A8K8V0 405 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 DCAF12L2Q5VW00 463 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 MAMSTRQ6ZN01 415 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ASB16Q96NS5 453 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 RECKO95980 971 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 APCDD1Q8J025 514 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 CISD2Q8N5K1 135 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 MRPS28Q9Y2Q9 187 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 P2RY10O00398 339 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 MMP9P14780 707 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 MED17Q9NVC6 651 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 FLVCR1Q9Y5Y0 555 aa10.04□□□□□ -0.8
CDC42BPA-205ENST00000366769 ARID2Q68CP9 1835 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms