RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 DUX4L5P0CJ88 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L6P0CJ89 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L7P0CJ90 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DCTDP32321 178 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TGM4P49221 684 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ROM1Q03395 351 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PRDX4Q13162 271 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SNAPC1Q16533 368 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MICBQ29980 383 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 WDR38Q5JTN6 314 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 STUMQ69YW2 141 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 Q6YL49 198 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR5K1Q8NHB7 308 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SLC25A28Q96A46 364 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DMRTB1Q96MA1 342 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ABCB9Q9NP78 766 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TVP23BQ9NYZ1 205 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4Q9UBX2 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 LAMP5Q9UJQ1 280 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 COPS3Q9UNS2 423 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MGAM2Q2M2H8 2515 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF850A8MQ14 1090 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TMPRSS2O15393 492 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PRKYO43930 277 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 EPHA2P29317 976 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GNALP38405 381 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ESRRGP62508 458 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ATP6AP1Q15904 470 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GPR157Q5UAW9 335 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 AADACL4Q5VUY2 407 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FTMTQ8N4E7 242 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SCCPDHQ8NBX0 429 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CCL13Q99616 98 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PKP2Q99959 881 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PCGF1Q9BSM1 259 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ANXA2P2A6NMY6 339 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF254O75437 659 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RPS7P62081 194 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PDCD1Q15116 288 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 KDM4DQ6B0I6 523 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 C16orf87Q6PH81 154 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 KCTD18Q6PI47 426 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BCDIN3DQ7Z5W3 292 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 KRT77Q7Z794 578 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RPL3LQ92901 407 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR8B4Q96RC9 309 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RTL8AQ9BWD3 113 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DNTTIP1Q9H147 329 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 NOX4Q9NPH5 578 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF816-ZNF321PA0A0X1KG74 233 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMEM269A0A1B0GVZ9 245 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZAR1LA6NP61 321 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MITFO75030 526 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ARF6P62330 175 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CEACAM21Q3KPI0 293 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CDONQ4KMG0 1287 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 METTL11BQ5VVY1 283 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF788Q6ZQV5 615 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MEPCEQ7L2J0 689 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZDHHC23Q8IYP9 409 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMEM86BQ8N661 226 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ASB17Q8WXJ9 295 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ST8SIA4Q92187 359 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PIGCQ92535 297 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PPP1R14AQ96A00 147 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RNF170Q96K19 258 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MROQ9BYG7 248 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PBOV1Q9GZY1 135 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GABARAPL1Q9H0R8 117 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR51I2Q9H344 312 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms